diff --git a/scripts/combine9.py b/scripts/combine9.py new file mode 100644 index 0000000..cc3f926 --- /dev/null +++ b/scripts/combine9.py @@ -0,0 +1,39 @@ +import pandas as pd +import os +import numpy as np + +curdir = os.getcwd() +path_delim = '/' +df1 = pd.read_csv(curdir + path_delim + "data/users_23_09_2023_13_41.csv") +df2 = pd.read_excel(curdir + path_delim + "data/tests_23_09_2023_13_41.xlsx", sheet_name="data") + + +df = df1.merge(df2, on="_id", how='outer') +# print(df.columns) +# # df = pd.concat([df1, df3], ignore_index=True) +df['Age'] = 2023 - df['birthYear'] + + +df = df[["_id", "name_x", "abhaId", "aadharId", "Age", "gender", "category", "maritalStatus", "house", "district", "state", "pinCode", "phoneNumber", "classificationResult", "bloodGroup", "createdAt", "caste"]] +print(df) + +df.rename(columns={'_id': "Sample ID", "name_x": "Name", "abhaId": "ABHA ID", "aadharId": "Aadhaar ID", "gender": "Gender", "category": "Category", "maritalStatus": "Marital Status", "house": "Address", "district": "District", "state": "State", "pinCode": "Pincode", "phoneNumber": "Mobile Number", "createdAt": "Date", "classificationResult": "Test Result", "bloodGroup": "Blood Group", "Age": "Age", "caste": "Caste"}, inplace = True) +df = df.reindex(["Sample ID", "Name", "ABHA ID", "Aadhaar ID", "Age", "Gender", "Caste", "Category", "Marital Status", "Address", "District", "State", "Pincode", "Mobile Number", "Date", "Test Result", "Blood Group"], axis=1) +# df['Date'] = pd.to_datetime(df["Date"].dt.strftime('%d-%m-%Y')) + +# df = df.sort_values(by=['Date'], ascending=True) +df_final = df + +df_final.loc[df_final['Test Result'] == 'Normal', 'Test Result'] = 'Normal (HbA)' +df_final.loc[df_final['Test Result'] == 'Sickle Cell Trait', 'Test Result'] = 'Sickle Cell Trait (HbAS)' +df_final.loc[df_final['Test Result'] == 'SCT', 'Test Result'] = 'Sickle Cell Trait (HbAS)' +df_final.loc[df_final['Test Result'] == 'SCD', 'Test Result'] = 'Sickle cell Disease (HbSS)' +df_final.loc[df_final['Test Result'] == 'PBL', 'Test Result'] = 'Positive Borderline' +df_final.loc[df_final['Test Result'] == 'NBL', 'Test Result'] = 'Negative Borderline' +df_final.loc[df_final['Gender'] == 'Male', 'Gender'] = 'MALE' +df_final.loc[df_final['Gender'] == 'Female', 'Gender'] = 'FEMALE' +print(df_final.groupby(["Test Result"]).describe()) + +writer = pd.ExcelWriter(curdir + path_delim + "data/Sept23.xlsx", engine = 'openpyxl') +df_final.to_excel(writer, sheet_name = 'op', index=False) +writer.close()