nagpur changes
This commit is contained in:
Pritimay Sarkar
265
scripts/pdf_report.py
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265
scripts/pdf_report.py
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import sys
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import csv
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from xhtml2pdf import pisa
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import os
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import pandas as pd
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rptData = {}
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rptData['Person Name'] = "row['Name']"
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rptData['Age'] = "row['Age']"
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rptData['Gender'] = "row['Gender']"
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rptData['Age / Sex'] = "Male"
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rptData['Sample type'] = 'Capillary Whole Blood'
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rptData['Family History of Sickle Cell Anemia'] = 'Unknown'
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rptData['Marital Status'] = "row['Marital Status']"
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rptData['Test Date'] = "date"
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rptData['Patient ID'] = "row['ABHA ID']"
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rptData['Sample ID'] = "row['_id']"
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rptData['value'] = "row['Measured Deovix Ratio']"
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rd = rptData
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# template_path = os.path.join(THIS_DIR, 'report_template.html')
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report_template =r'''
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<!DOCTYPE html>
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<html>
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<head>
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<style>
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@media print {
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body {
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-webkit-print-color-adjust: exact;
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}
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}
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.person-details-row {
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display: flex;
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flex-direction: row;
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}
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.person-details-col {
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display: flex;
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flex-direction: column;
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height: 90px;
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width: 50%;
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margin: 1px;
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border: 0;
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}
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.test-details-row {
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border: 0;
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}
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.test-details-col {
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height: 100px;
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}
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.test-cell-div {
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/* border: 1px solid black; */
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border-collapse: collapse;
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height: 20px;
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padding: 10px;
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}
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.table-header {
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border: 1px solid black;
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margin: 0 0 -10px 10px;
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background-color: rgb(191, 191, 191);
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text-align: center;
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justify-content: center;
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align-items: center;
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display: flex;
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font-weight: 600;
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height: 50px;
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width: 98%;
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}
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@media print {
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.table-header {
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background-color: rgb(191, 191, 191) !important;
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print-color-adjust: exact;
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}
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}
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@media print {
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.vendorListHeading th {
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color: white !important;
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}
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}
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.test-method {
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font-weight: 200 !important;
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color: rgb(191, 191, 191);
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}
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.result-value {
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justify-content: center;
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align-items: center;
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display: flex;
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}
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.end-of-report {
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display: flex;
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align-items: center;
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justify-content: center;
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}
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.logo {
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background-color: red;
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width: 10;
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}
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table,
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th,
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td {
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border: 1px solid black;
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border-collapse: collapse;
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}
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ul {
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list-style-type: none;
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/* margin: 0; */
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/* padding: 0; */
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}
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</style>
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</head>
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<body>
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<div>
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<div class="logo">
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<img src="logo_nobg.png" width="138" height="128" alt="sickle cell logo" />
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</div>
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<table style="border: 1px solid black; margin: 10px; width: 98%;">
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<tr class="person-details-row">
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<td class="person-details-col" style="border-right: 2; width: 70%;">
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<div><strong>Person Name:</strong> {{ reportData["Person Name"] }}</div>
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<div><strong>Age / Sex:</strong> {{reportData['Age']}} / {{reportData['Gender']}}</div>
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<div><strong>Sample type:</strong>{{ reportData["Sample type"] }}</div>
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<div><strong>Family History of Sickle Cell Anemia:</strong>{{ reportData["Family History of Sickle Cell Anemia"] }}</div>
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</td>
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<td class="person-details-col" style="width: 30%;">
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<div><strong>Marital Status:</strong>{{ reportData["Marital Status"] }}</div>
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<div><strong>Test Date:</strong>{{ reportData["Test Date"] }}</div>
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<div><strong>ABHA ID:</strong>{{ reportData["Patient ID"] }}</div>
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<div><strong>Sample ID:</strong>{{ reportData["Sample ID"] }}</div>
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</td>
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</tr>
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</table>
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</div>
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<div style="height: 2px;width: 98%; background-color: rgb(56, 105, 166); margin: 30px 10px 40px 10px;"></div>
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<div>
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<div class="table-header">POINT OF CARE SICKLE CELL ANEMIA TEST</div>
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<table class="test-details-table" style="border: 1px solid black; margin: 10px; width: 98%;">
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<tr style="height: 50px;">
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<th>
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Test Description
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</th>
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<th>
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RESULT
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</th>
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<th>
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REFERENCE RANGES
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</th>
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</tr>
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<tr class="test-details-row">
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<td class="test-details-col" style="width: 20%; margin: 10px;">
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<div style="margin: 10px;">Sickle Cell
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Anemia
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<div class="test-method">(Method: HPOS)</div>
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</div>
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</td>
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<td style="width: 30%;">
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<div class="result-value">Ra = {{ reportData["value"] }}</div>
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<!-- <div class="test-cell-div">Normal</div>
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<div class="test-cell-div">Sickle Cell Trait</div>
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<div class="test-cell-div">Sickle Cell Disease</div>
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<div class="test-cell-div">Negative Borderline</div>
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<div class="test-cell-div">Positive Borderline</div> -->
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</td>
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<td style="width: 50%;">
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<div class="test-cell-div">
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< 0.16: Normal (HbA)</div>
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<div class="test-cell-div">0.165 – 0.235: Sickle-cell Trait (HbAS)</div>
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<div class="test-cell-div">> 0.24: Sickle-cell Disease (HbSS)</div>
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<div class="test-cell-div">0.16-0.165: Inconclusive (Negative Borderline)</div>
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<div class="test-cell-div">0.235 – 0.24: Inconclusive (Positive Borderline)</div>
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</td>
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<!-- <td style="width: 25%;">
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<div class="test-cell-div">Normal</div>
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<div class="test-cell-div">Sickle Cell Trait</div>
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<div class="test-cell-div">Sickle Cell Disease</div>
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<div class="test-cell-div">Recommended for HPLC or Electrophoresis Tests</div>
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<div class="test-cell-div">Recommended for HPLC or Electrophore</div>
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</td> -->
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</tr>
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</table>
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</div>
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<div>
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<!-- <div style="font-weight: 600; margin: 10px;">INTERPRETATION:</div> -->
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<div style="margin: 10px;">
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<strong>Test Principle:</strong> This point of care quantitative diagnostic test for sickle-cell anemia
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works on the principle of absorption
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spectroscopy. The test helps in differentiating heterozygous/homozygous hemoglobin from normal hemoglobin.
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</div>
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<div style="margin: 10px;">
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<strong>Method:</strong> High Performance Optical Spectroscopy (HPOS) for detection of Sickle cell trait and
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sickle cell disease in whole blood capillary blood samples.
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</div>
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<div style="margin: 10px;">
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<strong> Note:</strong>
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<!-- <ul>
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<li>a. Blood transfusion may have an impact on the test results.</li>
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<li>
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b. Patients already on sickle-cell medications may impact test results.
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</li>
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</ul> -->
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Borderline cases are reported as inconclusive. It may occur due to several factors such as medication,
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transfusion, field conditions and assay process. Further clinical tests are recommended in these cases for
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diagnosis.
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</div>
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<!-- <div
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style="margin: 80px 10px 20px 50px; width: 88%; display: flex; flex-direction: row; justify-content: space-between; align-items: center;">
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<div style="margin: 5px;">DATE:</div>
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<div style="margin: 5px;">Hematologist</div>
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</div> -->
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<!-- <div style="margin: 30px;">
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This report is for the perusal of doctor only. Not for medico legal cases. Clinical correlation is
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essential.
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Please contact us in case of unexpected result.
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</div> -->
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<div style="height: 3px;width: 98%; background-color: black; margin-top: 150px;"></div>
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<div class="end-of-report">
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*** END OF REPORT ***</div>
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<div style="display: flex; justify-content: center; align-items: center; flex-direction: column;">
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<div style="font-style: italic; color: rgb(191, 191, 191);">
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This is an electronically generated report. Generated at HH:MM hrs on DD-MMM-YYYY.
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</div>
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<div>
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Note: Assay results should be correlated clinically with other clinical findings
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</div>
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</div>
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</div>
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</body>
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</html>
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'''
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# rptHtml = j2_env.from_string(report_template).render(reportData=rd)
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reportFile = open('report.pdf','w+b')
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pisa_status = pisa.CreatePDF(report_template, dest=reportFile)
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if not pisa_status.err:
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print("Created PDF report %s." % outFilename)
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#os.remove(rd['qrcodeImgFile'])
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