diff --git a/scripts/coefficients.py b/scripts/coefficients.py new file mode 100644 index 0000000..34dd083 --- /dev/null +++ b/scripts/coefficients.py @@ -0,0 +1,76 @@ +import os +import firebase_admin +from firebase_admin import credentials +from firebase_admin import firestore +from google.cloud.firestore_v1.base_query import FieldFilter +import pandas as pd +from datetime import datetime +import sys + +# Initialize Firebase Admin SDK +cred = credentials.Certificate(os.getcwd() + '/' + 'keys/hpos-preprod-firebase-adminsdk.json') # Replace with your own service account key path +firebase_admin.initialize_app(cred) + +# Get a reference to the Firestore database +db = firestore.client() + +# Specify the collections +patient_collection = db.collection("devices") +# test_collection = db.collection("testData") +# start_date = sys.argv[1] # '2023-09-12' #input("Please enter the start date (yyyy-mm-dd): ") +# end_date = sys.argv[2] #'2023-07-16' #input("Please enter the end date (yyyy-mm-dd): ") + +# query = test_collection.where(filter=FieldFilter("testTime", ">=", start_date)).where(filter=FieldFilter("testTime", "<", end_date)) +docs = patient_collection.stream() + +# Prepare data to store in CSV +data = [] +for doc in docs: + doc_data = doc.to_dict() + # patient_id = patient_data["_id"] + + # # Query the document from testData collection based on the common _id + # test_docs = test_collection.where("_id", "==", patient_id).stream() + + # for test_doc in test_docs: + # print(test_doc) + # test_data = test_doc.to_dict() + + # # Combine the data from both collections into a single dictionary + # combined_data = {**patient_data, **test_data} + + # # Fill empty fields in test_data with corresponding values from patient_data + # for key, value in combined_data.items(): + # if value == "" and key in patient_data: + # combined_data[key] = patient_data[key] + + # data.append(combined_data) + data.append(doc_data) + +# Convert the data to a DataFrame +df = pd.DataFrame(data) +print(df) +print(df.size) + +# df = df[["_id", "classificationResult", "calculatedRatio", "deviceId", "deviceRatio", "kitSerial", "led1Average", "led1Buffer", "led1Sample", "led2Average", "led2Buffer", "led2Sample", "deviceSerialNumber", "name", "testTime", "resultData"]] +# # df = df.groupby(["classificationResult"]).describe() +# df_count = df.groupby(["classificationResult"]).describe()["calculatedRatio"]["count"] +# print(df.groupby(["classificationResult"]).describe()["calculatedRatio"]["count"]) + +# print("duplicates", len(df['_id']) - len(df['_id'].drop_duplicates())) + +# Save the DataFrame to a CSV file +output_filename = f'devices_{datetime.today().strftime("%d_%m_%Y_%H_%M")}.xlsx' + +downloads_dir = os.path.join(os.path.expanduser("~"), "Downloads") +output_path = os.path.join(downloads_dir, output_filename) +writer = pd.ExcelWriter(output_path, engine = 'openpyxl') +df.to_excel(writer, sheet_name = 'data', index=False) +# df_count.to_excel(writer, sheet_name = "count") +writer.close() + +print(f"Data saved to '{output_path}'") + +# Close the Firebase Admin SDK +firebase_admin.delete_app(firebase_admin.get_app()) +