import os import firebase_admin from firebase_admin import credentials from firebase_admin import firestore from google.cloud.firestore_v1.base_query import FieldFilter import pandas as pd from datetime import datetime import sys # Initialize Firebase Admin SDK cred = credentials.Certificate(os.getcwd() + '/' + 'keys/hpos-prod-firebase-adminsdk.json') # Replace with your own service account key path firebase_admin.initialize_app(cred) # Get a reference to the Firestore database db = firestore.client() # Specify the collections patient_collection = db.collection("patientData") test_collection = db.collection("testData") start_date = sys.argv[1] # '2023-09-12' #input("Please enter the start date (yyyy-mm-dd): ") end_date = sys.argv[2] #'2023-07-16' #input("Please enter the end date (yyyy-mm-dd): ") query = test_collection.where(filter=FieldFilter("testTime", ">=", start_date)).where(filter=FieldFilter("testTime", "<", end_date)) docs = query.stream() # Prepare data to store in CSV data = [] for doc in docs: doc_data = doc.to_dict() # patient_id = patient_data["_id"] # # Query the document from testData collection based on the common _id # test_docs = test_collection.where("_id", "==", patient_id).stream() # for test_doc in test_docs: # print(test_doc) # test_data = test_doc.to_dict() # # Combine the data from both collections into a single dictionary # combined_data = {**patient_data, **test_data} # # Fill empty fields in test_data with corresponding values from patient_data # for key, value in combined_data.items(): # if value == "" and key in patient_data: # combined_data[key] = patient_data[key] # data.append(combined_data) data.append(doc_data) # Convert the data to a DataFrame df = pd.DataFrame(data) print(df) print(df.size) df = df[["_id", "classificationResult", "calculatedRatio", "deviceId", "deviceRatio", "kitSerial", "led1Average", "led1Buffer", "led1Sample", "led2Average", "led2Buffer", "led2Sample", "deviceSerialNumber", "name", "testTime"]] # df = df.groupby(["classificationResult"]).describe() df_count = df.groupby(["classificationResult"]).describe()["calculatedRatio"]["count"] print(df.groupby(["classificationResult"]).describe()["calculatedRatio"]["count"]) print("duplicates", len(df['_id']) - len(df['_id'].drop_duplicates())) # Save the DataFrame to a CSV file output_filename = f'tests_{datetime.today().strftime("%d_%m_%Y_%H_%M")}.xlsx' downloads_dir = os.path.join(os.path.expanduser("~"), "Downloads") output_path = os.path.join(downloads_dir, output_filename) writer = pd.ExcelWriter(output_path, engine = 'openpyxl') df.to_excel(writer, sheet_name = 'data', index=False) df_count.to_excel(writer, sheet_name = "count") writer.close() print(f"Data saved to '{output_path}'") # Close the Firebase Admin SDK firebase_admin.delete_app(firebase_admin.get_app())