Files
hpos-data/cloud-functions/nodejs/functions/index.js
Pritimay Sarkar 4bf9ffd5f6 slope ratio
2023-12-26 00:08:46 +05:30

457 lines
17 KiB
JavaScript

const { onRequest } = require("firebase-functions/v2/https");
const logger = require("firebase-functions/logger");
const functions = require("firebase-functions");
const admin = require("firebase-admin");
const moment = require('moment');
const fs = require('fs');
const csv = require('csv-parser');
const html_to_pdf = require('html-pdf-node');
admin.initializeApp();
exports.registerUser = functions.region("asia-south1").https.onRequest(async (req, res) => {
res.set('Access-Control-Allow-Origin', "*")
res.set('Access-Control-Allow-Methods', 'GET, POST');
if (req.method === "OPTIONS") {
// stop preflight requests here
res.set("Access-Control-Allow-Headers", "Content-Type, x-client");
res.status(204).send('');
return;
}
try {
const token = "e16a1bd15af2ee640f5a7a18c8d8333f5f01f7c66e003bbc21ee52870f1bce27";
logger.info(`User-Agent ${req.get("User-Agent")}`);
logger.info(`token ${req.get("x-client")}`);
if (req.get("x-client") !== token) {
res.json({ status: "403", message: "auth error", result: "true" });
}
else {
const { body } = req;
const { _id } = body;
logger.info(`_id ${_id}`);
await admin
.firestore()
.collection("patientData")
.add(Object.assign(Object.assign({}, body), { createdAt: moment().utcOffset("+05:30").format("YYYY-MM-DD HH:mm:ss") }))
res.json({ status: "200" });
}
}
catch (err) {
logger.info(`error ${err}`);
res.json({ status: "400", message: "some error.", result: "true" });
}
});
exports.addBloodTest = functions.region("asia-south1").https.onRequest(async (req, res) => {
res.set('Access-Control-Allow-Origin', "*")
res.set('Access-Control-Allow-Methods', 'GET, POST');
if (req.method === "OPTIONS") {
// stop preflight requests here
res.set("Access-Control-Allow-Headers", "Content-Type, x-client");
res.status(204).send('');
return;
}
try {
const token = "e16a1bd15af2ee640f5a7a18c8d8333f5f01f7c66e003bbc21ee52870f1bce27";
logger.info(`User-Agent ${req.get("User-Agent")}`);
logger.info(`token ${req.get("x-client")}`);
if (req.get("x-client") !== token) {
res.json({ status: "403", message: "auth error", result: "true" });
}
else {
const { body } = req;
const { _id } = body;
logger.info(`_id ${_id}`);
await admin
.firestore()
.collection("testData")
.add(Object.assign(Object.assign({}, body), { testTime: moment().utcOffset("+05:30").format("YYYY-MM-DD HH:mm:ss") }))
res.json({ status: "200" });
}
}
catch (err) {
logger.info(`error ${err}`);
res.json({ status: "400", message: "some error.", result: "true" });
}
});
exports.reportDownload = functions.region("asia-south1").https.onRequest(async (req, res) => {
res.set('Access-Control-Allow-Origin', "*")
res.set('Access-Control-Allow-Methods', 'GET, POST');
if (req.method === "OPTIONS") {
// stop preflight requests here
res.set("Access-Control-Allow-Headers", "Content-Type, x-client");
res.status(204).send('');
return;
}
try {
const token = "e16a1bd15af2ee640f5a7a18c8d8333f5f01f7c66e003bbc21ee52870f1bce27";
logger.info(`User-Agent ${req.get("User-Agent")}`);
logger.info(`token ${req.get("x-client")}`);
if (req.get("x-client") !== token) {
res.json({ status: "403", message: "auth error", result: "true" });
}
else {
const { body } = req;
const { data } = body;
logger.info(`_id ${_id}`);
const fileName = `${data["_id"]}.pdf`;
// await makePdf();
res.sendFile(fileName, options, function (err) {
if (err) {
next(err);
} else {
console.log('Sent:', fileName);
}
});
}
}
catch (err) {
logger.info(`error ${err}`);
res.json({ status: "400", message: "some error.", result: "true" });
}
});
/**
* Triggered by a change to a Firestore document.
*
* @param {!Object} event Event payload.
* @param {!Object} context Metadata for the event.
*/
// const functions = require("firebase-functions");
// const admin = require("firebase-admin");
// const moment = require('moment');
// admin.initializeApp();
exports.kitAlert = async (event, context) => {
const resource = context.resource;
// log out the resource string that triggered the function
console.log('Function triggered by change to: ' + resource);
// now log the full event object
console.log(JSON.stringify(event));
const { kitSerial, classificationResult, _id, led1Average, led2Average, led3Average, deviceRatio, abs1, abs2 } = event.value.fields;
console.log('kitSerial', kitSerial);
console.log('classificationResult', classificationResult);
// if (classificationResult?.stringValue?.includes("Trait")) {
// const currentKitTests = await admin.firestore().collection("testData").where("kitSerial", "==", kitSerial.stringValue).get();
// let traitCount = 0;
// currentKitTests?.docs.forEach((x) => {
// if (x.data().classificationResult?.includes("Trait")) {
// traitCount++;
// }
// });
// console.log("traitCount", traitCount);
// if (traitCount > 2) {
// await admin.firestore().collection("alerts").add({
// name: 'Kit Alert',
// traitCount: traitCount,
// message: `${kitSerial.stringValue} has ${traitCount} traits`
// });
// }
// const sgMail = require('@sendgrid/mail');
// sgMail.setApiKey('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');
// const msg = {
// to: ['hpos.smi@gmail.com', 'pritimay@sminnovations.in'],
// from: 'pritimay@sminnovations.in',
// subject: `Kit Alert: ${kitSerial.stringValue}`,
// text: `${kitSerial.stringValue} has ${traitCount} traits`,
// html: `<p>${kitSerial.stringValue} has ${traitCount} traits</p>`,
// };
// sgMail.send(msg);
// }
const led1Intercept = -0.85965;
const led3Slope = 0.184991;
const led3Intercept = 0.001704;
console.log('_id', _id?.stringValue);
const LED1Average = led1Average?.doubleValue;
const LED3Average = led3Average?.doubleValue;
const Abs427 = LED1Average * 1.2648 - 0.85965;
const Abs555 = LED3Average * 0.184991 + 0.001704;
const pdr = Abs555 / Abs427;
// const pdr = 0.239;
console.log(pdr);
let classification = "NA";
if (pdr > 0 && pdr <= 0.16) {
classification = "Normal";
}
if (pdr > 0.16 && pdr <= 0.165) {
classification = "Negative Borderline";
}
if (pdr > 0.165 && pdr <= 0.235) {
classification = "Sickle Cell Trait";
}
if (pdr > 0.235 && pdr <= 0.24) {
classification = "Positive Borderline";
}
if (pdr > 0.24 && pdr <= 1) {
classification = "Sickle Cell Disease";
}
// device ratio class
const devRatio = deviceRatio?.doubleValue;
let devRatioClass = "INVALID";
if (devRatio > 0 && devRatio <= 0.55) {
devRatioClass = "Normal";
}
if (devRatio > 0.55 && devRatio <= 0.575) {
devRatioClass = "Negative Borderline";
}
if (devRatio > 0.575 && devRatio <= 0.85) {
devRatioClass = "Sickle Cell Trait";
}
if (devRatio > 0.85 && devRatio <= 0.9) {
devRatioClass = "Positive Borderline";
}
if (devRatio > 0.9 && devRatio <= 1) {
devRatioClass = "Sickle Cell Disease";
}
const slope = (led1Average?.doubleValue - led2Average?.doubleValue) / (435 - 415);
const slopeRatio = Math.abs(led3Average?.doubleValue / slope);
let slopeRatioClass = "INVALID";
if (slopeRatio > 0 && slopeRatio <= 35.0) {
slopeRatioClass = "Normal";
}
if (slopeRatio > 35.0 && slopeRatio <= 40.0) {
slopeRatioClass = "Negative Borderline";
}
if (slopeRatio > 40.0 && slopeRatio <= 70.0) {
slopeRatioClass = "Sickle Cell Trait";
}
if (slopeRatio > 70.0 && slopeRatio <= 75.0) {
slopeRatioClass = "Positive Borderline";
}
if (slopeRatio > 75.0 && slopeRatio <= 300.0) {
slopeRatioClass = "Sickle Cell Disease";
}
console.log(classification);
const docs = await admin.firestore().collection("testData").where("_id", "==", _id.stringValue).get();
docs?.forEach(async (doc) => {
await admin.firestore().collection("testData").doc(doc.id).update({
// abs427: Abs427,
// abs555: Abs555,
// predictedDenovixRatio: pdr,
// prdClassification: classification
// incubationTime: admin.firestore.FieldValue.delete()
deviceRatioClass: devRatioClass,
slopeRatio: slopeRatio,
slopeRatioClass: slopeRatioClass,
});
})
};
/**
* Triggered by a change to a Firestore document.
*
* @param {!Object} event Event payload.
* @param {!Object} context Metadata for the event.
*/
// const functions = require("firebase-functions");
// const admin = require("firebase-admin");
// const moment = require('moment');
// admin.initializeApp();
exports.dataRegularity = async (event, context) => {
const resource = context.resource;
// log out the resource string that triggered the function
console.log('Function triggered by change to: ' + resource);
// now log the full event object
console.log(JSON.stringify(event));
const { kitSerial, classificationResult, _id, deviceId, led1Buffer, led2Buffer, led1Sample, led2Sample } = event.value.fields;
console.log('_id', _id?.stringValue);
if (led1Buffer?.stringValue > 27000 || led2Buffer?.stringValue > 28000 || led1Sample?.stringValue) {
const currentKitTests = await admin.firestore().collection("testData").where("kitSerial", "==", kitSerial.stringValue).get();
let traitCount = 0;
currentKitTests?.docs.forEach((x) => {
if (x.data().classificationResult?.includes("Trait")) {
traitCount++;
}
});
await admin.firestore().collection("alerts").add({
name: 'Data Regularity',
kit: kitSerial.stringValue,
deviceId: deviceId,
message: `${_id.stringValue} has some irregularity in data`,
createdAt: moment().utcOffset("+05:30").format("YYYY-MM-DD HH:mm:ss")
});
}
};
const axios = require('axios');
const admin = require("firebase-admin");
const moment = require('moment');
admin.initializeApp();
exports.migrateUsers = async (event, context) => {
const resource = context.resource;
// log out the resource string that triggered the function
console.log('Function triggered by change to: ' + resource);
// now log the full event object
console.log(JSON.stringify(event));
const { _id, name } = event.value.fields;
const { _idSearch, abhaIdSearch, aadharIdSearch } = event.value.fields;
if (!_idSearch?.stringValue) {
const docs = await admin.firestore().collection("patientData").where("_id", "==", _id.stringValue).get();
docs?.forEach(async (doc) => {
await admin.firestore().collection("patientData").doc(doc.id).update({
_idSearch: `${moment().format('YYYYMMDD')}${doc.data()._id}`,
abhaIdSearch: `${moment().format('YYYYMMDD')}${doc.data().abhaId}`,
aadharIdSearch: `${moment().format('YYYYMMDD')}${doc.data().aadharId}`,
});
console.log('search logic', _id.stringValue);
})
}
const NO_OF_COPIES = 3;
for (let i = 0; i < NO_OF_COPIES; i++) {
await axios.post("https://asia-south1-hpos-preprod.cloudfunctions.net/registerUser",
{
"_id": `${_id.stringValue}${i}`,
"aadharId": "2808202300001",
"abhaId": "12434949797979",
"birthYear": "2000",
"bloodGroup": "",
"careOf": "",
"caste": "",
"city": "Bengaluru",
"district": "Bengaluru",
"gender": "Male",
"house": "42",
"maritalStatus": "Single",
"name": name.stringValue,
"phoneNumber": "9123456789",
"pinCode": "560060",
"registeredBy": "admin",
"registrationCenterName": "SMI",
"sickleCellHistory": null,
"state": "Karnataka",
"subCaste": "",
"testStatus": false,
"underMedication": false,
"underTransfusion": false,
"userImageURL": "https://hpos-prod.web.app/logo.png"
}, {
headers: {
"Content-Type": "application/json",
"x-client": "e16a1bd15af2ee640f5a7a18c8d8333f5f01f7c66e003bbc21ee52870f1bce27"
}
})
}
};
/**
* Triggered by a change to a Firestore document.
*
* @param {!Object} event Event payload.
* @param {!Object} context Metadata for the event.
*/
const admin = require("firebase-admin");
const moment = require('moment');
admin.initializeApp();
exports.retestMarking = async (event, context) => {
const resource = context.resource;
// log out the resource string that triggered the function
console.log('Function triggered by change to: ' + resource);
// now log the full event object
console.log(JSON.stringify(event));
const { _id, classificationResult } = event.value.fields;
console.log("classificationResult", classificationResult.stringValue);
if (classificationResult?.stringValue?.includes("Positive Borderline") || classificationResult?.stringValue?.includes("Inconclusive") || classificationResult?.stringValue?.includes("Trait")) {
const docs = await admin.firestore().collection("patientData").where("_id", "==", _id.stringValue).get();
docs?.forEach(async (doc) => {
await admin.firestore().collection("patientData").doc(doc.id).update({
testStatus: false,
retested: true
// incubationTime: admin.firestore.FieldValue.delete()
});
})
}
const { _idSearch, abhaIdSearch, aadharIdSearch } = event.value.fields;
if (!_idSearch?.stringValue) {
const docs = await admin.firestore().collection("patientData").where("_id", "==", _id.stringValue).get();
docs?.forEach(async (doc) => {
await admin.firestore().collection("patientData").doc(doc.id).update({
_idSearch: `${moment().format('YYYYMMDD')}${_id}`,
abhaIdSearch: `${moment().format('YYYYMMDD')}${abhaId}`,
aadharIdSearch: `${moment().format('YYYYMMDD')}${aadharId}`,
});
console.log('search logic', _id.stringValue);
})
}
};
/**
* Triggered by a change to a Firestore document.
*
* @param {!Object} event Event payload.
* @param {!Object} context Metadata for the event.
*/
const axios = require('axios');
const admin = require("firebase-admin");
const moment = require('moment');
admin.initializeApp();
exports.sampleClassification = async (event, context) => {
const resource = context.resource;
// log out the resource string that triggered the function
console.log('Function triggered by change to: ' + resource);
// now log the full event object
console.log(JSON.stringify(event));
const { _id, calculatedRatio, deviceRatio, led1Buffer, led2Buffer, led1Sample, led2Sample} = event.value.fields;
const predictionResponse = await axios.post("https://asia-south1-hpos-af3cc.cloudfunctions.net/prediction",
{
"_id": `${_id.stringValue}`,
"calculatedRatio": calculatedRatio.stringValue || calculatedRatio.doubleValue,
"deviceRatio": deviceRatio.stringValue || deviceRatio.doubleValue || deviceRatio.integerValue,
"led1Buffer": led1Buffer.stringValue || led1Buffer.doubleValue || led1Buffer.integerValue,
"led2Buffer": led2Buffer.stringValue || led2Buffer.doubleValue || led2Buffer.integerValue,
"led1Sample": led1Sample.stringValue || led1Sample.doubleValue || led1Sample.integerValue,
"led2Sample": led2Sample.stringValue || led2Sample.doubleValue || led2Sample.integerValue
}, {
headers: {
"Content-Type": "application/json",
"x-client": "e16a1bd15af2ee640f5a7a18c8d8333f5f01f7c66e003bbc21ee52870f1bce27"
}
});
const { predictedClass } = predictionResponse.data;
console.log("predictedClass", predictedClass);
const docs = await admin.firestore().collection("testData").where("_id", "==", _id.stringValue).get();
docs?.forEach(async (doc) => {
await admin.firestore().collection("testData").doc(doc.id).update({
predictedClass: predictedClass,
modelId: "1",
modelVersion: "1.0.1"
});
})
};