diff --git a/Hemocube_triplate.ino b/Hemocube_triplate.ino new file mode 100644 index 0000000..85017c5 --- /dev/null +++ b/Hemocube_triplate.ino @@ -0,0 +1,830 @@ +#include "ADS1X15.h" +#include +#include +#include +#include +#include + +const int buttonPin = 12; // Button pin +const int PIN_CS = 10; +const int GAIN_1 = 0x1; +const int GAIN_2 = 0x0; +const unsigned int steps = 512; +unsigned int sines_of_steps[steps]; +char data; //Variable to store the data + +ADS1115 ADS(0x48); + +int blue_dac = 2220; //390 2940 +int green_dac = 1880; //2320 2860 + +int green_sample_size = 100; +int blue_sample_size = 100; + +int loopcounter = 0; +unsigned long long intensity_storage = 0; +int temp_counter = 0; + +float avg_storage = 0; +float avg_blueS = 0; +float avg_blueS1 = 0; +float avg_blueS2 = 0; +float avg_blueS3 = 0; +float avg_greenS = 0; +float avg_greenS1 = 0; +float avg_greenS2 = 0; +float avg_greenS3 = 0; +float avg_blueB = 0; +float avg_blueB1 = 0; +float avg_blueB2 = 0; +float avg_blueB3 = 0; +float avg_greenB = 0; +float avg_greenB1 = 0; +float avg_greenB2 = 0; +float avg_greenB3 = 0; +float old_blue = 0; +float old_green = 0; +float avg_green = 0; +float avg_blue = 0; +// +bool buttonState = false; // Current button state +bool lastButtonState = false; // Previous button state +//int taskNumber = 1; // Current task number +bool taskStarted = false; +//int buttonPressCount = 0; +int bs; +int split_counter = 0; +int intensity_display = 1; +int plotter = 0; +int blue_stable_time = 50; +int green_stable_time = 50; + +int blue_samples = 10; +int green_samples = 10; + +int moving_average_array[] = {{0, 0, 0, 0, 0, 0, 0, 0, 0, 0}}; +int sorting_array[] = {{0, 0, 0, 0, 0, 0, 0, 0, 0, 0}}; +int moving_average = 0; +int j = 0; +int temp_sort = 0; + +void setup() {{ + + Serial.begin(115200); + Serial.println("SN HCV1001"); + pinMode(PIN_CS, OUTPUT); + pinMode(buttonPin, INPUT_PULLUP); + SPI.begin(); + SPI.setClockDivider(SPI_CLOCK_DIV2); + ADS.begin(); +}} + +void setOutput(byte channel, byte gain, byte shutdown, unsigned int val) +{{ + byte lowByte = val & 0xff; + byte highByte = ((val >> 8) & 0xff) | channel << 7 | gain << 5 | shutdown << 4; + PORTB &= 0xfb; + SPI.transfer(highByte); + SPI.transfer(lowByte); + PORTB |= 0x4; +}} + +void loop() {{ + loopcounter = 0; + avg_storage = 0; + split_counter = 0; + + if (Serial.available()) {{ + char data = Serial.read(); + + if (data == 'B') {{ + taskStarted = false; + Serial.println("#Place Buffer"); + + while (!taskStarted) {{ + buttonState = digitalRead(buttonPin); + + if (buttonState == HIGH && lastButtonState == LOW) {{ + lastButtonState = buttonState; + taskStarted = true; + startTask1(); + }} + + lastButtonState = buttonState; + }} + + taskStarted = false; + while (!taskStarted) {{ + buttonState = digitalRead(buttonPin); + + if (buttonState == HIGH && lastButtonState == LOW) {{ + lastButtonState = buttonState; + taskStarted = true; + startTask2(); + }} + + lastButtonState = buttonState; + }} + }} + else if (data == 'S') {{ + Serial.println("Place Sample"); + while (digitalRead(buttonPin) == LOW) {{ + delay(10); + }} + startTask2(); + }} + + else if (data == 'P') {{ //Check if the received character is 1 + Serial.print("RESULT"); + Serial.print(" "); Serial.print("SN HCV1001"); Serial.print(" "); Serial.print(avg_greenB); Serial.print(" "); Serial.print(avg_blueB); Serial.print(" "); Serial.print(avg_greenS); Serial.print(" "); Serial.print(avg_blueS); Serial.print(" ");Serial.print("REND");Serial.println(" "); + + delay(100); + }} + + }} +}} +void startTask1() {{ + Serial.println("#Buffer Started"); + setOutput(1, GAIN_1, 1, 0); + setOutput(0, GAIN_1, 1, green_dac); + memset (moving_average_array, 0, 10); + temp_counter = 0; + intensity_storage = 0; + float f = ADS.toVoltage(1); // voltage factor + for (int i = 0; i < green_samples + green_stable_time; i += 1) + {{ + + int16_t val_0 = ADS.readADC(0); + int16_t val_1 = ADS.readADC(1); + int16_t val_2 = ADS.readADC(2); + int16_t val_3 = ADS.readADC(3); + moving_average_array[i % 10] = val_1; + for (int j = 0; j < 10; j++) + {{ + sorting_array[j] = moving_average_array[j]; + }} + if (i >= green_stable_time) + {{ + for (int j = 0; j < 6; j++) + {{ + for (int k = 0; k < (9 - j); k++) + {{ + if (sorting_array[k] > sorting_array[k + 1]) + {{ + temp_sort = sorting_array[k]; + sorting_array[k] = sorting_array[k + 1]; + sorting_array[k + 1] = temp_sort; + }} + }} + }} + moving_average = (sorting_array[4] / 2) + (sorting_array[5] / 2); + if ((val_1 > (moving_average * 0.9)) and (val_1 < (moving_average * 1.1))) + {{ + intensity_storage += val_1; + temp_counter++; + }} + }} + + if (intensity_display == 1) + {{ + // Serial.print("DAC_value : "); Serial.print(i); Serial.print('\t'); Serial.print('\t'); Serial.print("Green_Resistor_drop: "); Serial.print(val_2); + // Serial.print('\t'); Serial.print('\t'); Serial.print("PD_output: "); Serial.print(val_1); Serial.print('\t'); Serial.print('\t'); Serial.print("PD_2X_output: "); Serial.println(val_0); + }} + if (plotter == 1) + {{ + Serial.println(val_1); + }} + //delay(200); + }} + avg_greenB1 = intensity_storage / temp_counter; + delay(500); + + setOutput(0, GAIN_1, 1, 0); + setOutput(1, GAIN_1, 1, blue_dac); + memset (moving_average_array, 0, 10); + temp_counter = 0; + intensity_storage = 0; + for (int i = 0; i < blue_samples + blue_stable_time; i += 1) + {{ + + int16_t val_0 = ADS.readADC(0); + int16_t val_1 = ADS.readADC(1); + int16_t val_2 = ADS.readADC(2); + int16_t val_3 = ADS.readADC(3); + moving_average_array[i % 10] = val_1; + //Serial.println(moving_average_array[0]); + for (int j = 0; j < 10; j++) + {{ + sorting_array[j] = moving_average_array[j]; + }} + //Serial.println(sorting_array[0]); + if (i >= blue_stable_time) + {{ + for (int j = 0; j < 6; j++) + {{ + for (int k = 0; k < (9 - j); k++) + {{ + if (sorting_array[k] > sorting_array[k + 1]) + {{ + temp_sort = sorting_array[k]; + sorting_array[k] = sorting_array[k + 1]; + sorting_array[k + 1] = temp_sort; + }} + }} + }} + moving_average = (sorting_array[4] / 2) + (sorting_array[5] / 2); + if ((val_1 > (moving_average * 0.9)) and (val_1 < (moving_average * 1.1))) + {{ + intensity_storage += val_1; + + temp_counter++; + }} + }} + if (intensity_display == 1) + {{ + // Serial.print("DAC_value : "); Serial.print(i); Serial.print('\t'); Serial.print('\t'); Serial.print("Blue_Resistor_drop: "); Serial.print(val_3); + // Serial.print('\t'); Serial.print('\t'); Serial.print("PD_output: "); Serial.print(val_1); Serial.print('\t'); Serial.print('\t'); Serial.print("PD_2X_output: "); Serial.println(val_0); + }} + if (plotter == 1) + {{ + Serial.println(val_1); + }} + //delay(200); + }} + avg_blueB1 = intensity_storage / temp_counter; + + setOutput(0, GAIN_1, 1, 0); + setOutput(1, GAIN_1, 1, 0); + delay (100); + + setOutput(1, GAIN_1, 1, 0); + setOutput(0, GAIN_1, 1, green_dac); + memset (moving_average_array, 0, 10); + temp_counter = 0; + intensity_storage = 0; + f = ADS.toVoltage(1); // voltage factor + for (int i = 0; i < green_samples + green_stable_time; i += 1) + {{ + + int16_t val_0 = ADS.readADC(0); + int16_t val_1 = ADS.readADC(1); + int16_t val_2 = ADS.readADC(2); + int16_t val_3 = ADS.readADC(3); + moving_average_array[i % 10] = val_1; + for (int j = 0; j < 10; j++) + {{ + sorting_array[j] = moving_average_array[j]; + }} + if (i >= green_stable_time) + {{ + for (int j = 0; j < 6; j++) + {{ + for (int k = 0; k < (9 - j); k++) + {{ + if (sorting_array[k] > sorting_array[k + 1]) + {{ + temp_sort = sorting_array[k]; + sorting_array[k] = sorting_array[k + 1]; + sorting_array[k + 1] = temp_sort; + }} + }} + }} + moving_average = (sorting_array[4] / 2) + (sorting_array[5] / 2); + if ((val_1 > (moving_average * 0.9)) and (val_1 < (moving_average * 1.1))) + {{ + intensity_storage += val_1; + temp_counter++; + }} + }} + + if (intensity_display == 1) + {{ + // Serial.print("DAC_value : "); Serial.print(i); Serial.print('\t'); Serial.print('\t'); Serial.print("Green_Resistor_drop: "); Serial.print(val_2); + // Serial.print('\t'); Serial.print('\t'); Serial.print("PD_output: "); Serial.print(val_1); Serial.print('\t'); Serial.print('\t'); Serial.print("PD_2X_output: "); Serial.println(val_0); + }} + if (plotter == 1) + {{ + Serial.println(val_1); + }} + //delay(200); + }} + avg_greenB2 = intensity_storage / temp_counter; + delay(500); + + setOutput(0, GAIN_1, 1, 0); + setOutput(1, GAIN_1, 1, blue_dac); + memset (moving_average_array, 0, 10); + temp_counter = 0; + intensity_storage = 0; + for (int i = 0; i < blue_samples + blue_stable_time; i += 1) + {{ + + int16_t val_0 = ADS.readADC(0); + int16_t val_1 = ADS.readADC(1); + int16_t val_2 = ADS.readADC(2); + int16_t val_3 = ADS.readADC(3); + moving_average_array[i % 10] = val_1; + //Serial.println(moving_average_array[0]); + for (int j = 0; j < 10; j++) + {{ + sorting_array[j] = moving_average_array[j]; + }} + //Serial.println(sorting_array[0]); + if (i >= blue_stable_time) + {{ + for (int j = 0; j < 6; j++) + {{ + for (int k = 0; k < (9 - j); k++) + {{ + if (sorting_array[k] > sorting_array[k + 1]) + {{ + temp_sort = sorting_array[k]; + sorting_array[k] = sorting_array[k + 1]; + sorting_array[k + 1] = temp_sort; + }} + }} + }} + moving_average = (sorting_array[4] / 2) + (sorting_array[5] / 2); + if ((val_1 > (moving_average * 0.9)) and (val_1 < (moving_average * 1.1))) + {{ + intensity_storage += val_1; + + temp_counter++; + }} + }} + if (intensity_display == 1) + {{ + // Serial.print("DAC_value : "); Serial.print(i); Serial.print('\t'); Serial.print('\t'); Serial.print("Blue_Resistor_drop: "); Serial.print(val_3); + // Serial.print('\t'); Serial.print('\t'); Serial.print("PD_output: "); Serial.print(val_1); Serial.print('\t'); Serial.print('\t'); Serial.print("PD_2X_output: "); Serial.println(val_0); + }} + if (plotter == 1) + {{ + Serial.println(val_1); + }} + //delay(200); + }} + avg_blueB2 = intensity_storage / temp_counter; + + setOutput(0, GAIN_1, 1, 0); + setOutput(1, GAIN_1, 1, 0); +delay (100); + setOutput(1, GAIN_1, 1, 0); + setOutput(0, GAIN_1, 1, green_dac); + memset (moving_average_array, 0, 10); + temp_counter = 0; + intensity_storage = 0; + f = ADS.toVoltage(1); // voltage factor + for (int i = 0; i < green_samples + green_stable_time; i += 1) + {{ + + int16_t val_0 = ADS.readADC(0); + int16_t val_1 = ADS.readADC(1); + int16_t val_2 = ADS.readADC(2); + int16_t val_3 = ADS.readADC(3); + moving_average_array[i % 10] = val_1; + for (int j = 0; j < 10; j++) + {{ + sorting_array[j] = moving_average_array[j]; + }} + if (i >= green_stable_time) + {{ + for (int j = 0; j < 6; j++) + {{ + for (int k = 0; k < (9 - j); k++) + {{ + if (sorting_array[k] > sorting_array[k + 1]) + {{ + temp_sort = sorting_array[k]; + sorting_array[k] = sorting_array[k + 1]; + sorting_array[k + 1] = temp_sort; + }} + }} + }} + moving_average = (sorting_array[4] / 2) + (sorting_array[5] / 2); + if ((val_1 > (moving_average * 0.9)) and (val_1 < (moving_average * 1.1))) + {{ + intensity_storage += val_1; + temp_counter++; + }} + }} + + if (intensity_display == 1) + {{ + // Serial.print("DAC_value : "); Serial.print(i); Serial.print('\t'); Serial.print('\t'); Serial.print("Green_Resistor_drop: "); Serial.print(val_2); + // Serial.print('\t'); Serial.print('\t'); Serial.print("PD_output: "); Serial.print(val_1); Serial.print('\t'); Serial.print('\t'); Serial.print("PD_2X_output: "); Serial.println(val_0); + }} + if (plotter == 1) + {{ + Serial.println(val_1); + }} + //delay(200); + }} + avg_greenB3 = intensity_storage / temp_counter; + delay(500); + + setOutput(0, GAIN_1, 1, 0); + setOutput(1, GAIN_1, 1, blue_dac); + memset (moving_average_array, 0, 10); + temp_counter = 0; + intensity_storage = 0; + for (int i = 0; i < blue_samples + blue_stable_time; i += 1) + {{ + + int16_t val_0 = ADS.readADC(0); + int16_t val_1 = ADS.readADC(1); + int16_t val_2 = ADS.readADC(2); + int16_t val_3 = ADS.readADC(3); + moving_average_array[i % 10] = val_1; + //Serial.println(moving_average_array[0]); + for (int j = 0; j < 10; j++) + {{ + sorting_array[j] = moving_average_array[j]; + }} + //Serial.println(sorting_array[0]); + if (i >= blue_stable_time) + {{ + for (int j = 0; j < 6; j++) + {{ + for (int k = 0; k < (9 - j); k++) + {{ + if (sorting_array[k] > sorting_array[k + 1]) + {{ + temp_sort = sorting_array[k]; + sorting_array[k] = sorting_array[k + 1]; + sorting_array[k + 1] = temp_sort; + }} + }} + }} + moving_average = (sorting_array[4] / 2) + (sorting_array[5] / 2); + if ((val_1 > (moving_average * 0.9)) and (val_1 < (moving_average * 1.1))) + {{ + intensity_storage += val_1; + + temp_counter++; + }} + }} + if (intensity_display == 1) + {{ + // Serial.print("DAC_value : "); Serial.print(i); Serial.print('\t'); Serial.print('\t'); Serial.print("Blue_Resistor_drop: "); Serial.print(val_3); + // Serial.print('\t'); Serial.print('\t'); Serial.print("PD_output: "); Serial.print(val_1); Serial.print('\t'); Serial.print('\t'); Serial.print("PD_2X_output: "); Serial.println(val_0); + }} + if (plotter == 1) + {{ + Serial.println(val_1); + }} + //delay(200); + }} + avg_blueB3 = intensity_storage / temp_counter; +delay(100); + setOutput(0, GAIN_1, 1, 0); + setOutput(1, GAIN_1, 1, 0); + avg_blueB = (avg_blueB1 + avg_blueB2 + avg_blueB3) / 3; + avg_greenB = (avg_greenB1 + avg_greenB2 + avg_greenB3) / 3; + Serial.print("ok Green B Intensity: "); Serial.println(avg_greenB); + Serial.print("ok Blue B Intensity: "); Serial.println(avg_blueB); + Serial.println("#Buffer Completed"); + Serial.println("#Place sample"); + delay(200); + +}} +void startTask2() {{ + Serial.println("#Sample started"); + setOutput(1, GAIN_1, 1, 0); + setOutput(0, GAIN_1, 1, green_dac); + memset (moving_average_array, 0, 10); + temp_counter = 0; + intensity_storage = 0; + float f = ADS.toVoltage(1); // voltage factor + for (int i = 0; i < green_samples + green_stable_time; i += 1) + {{ + + int16_t val_0 = ADS.readADC(0); + int16_t val_1 = ADS.readADC(1); + int16_t val_2 = ADS.readADC(2); + int16_t val_3 = ADS.readADC(3); + moving_average_array[i % 10] = val_1; + for (int j = 0; j < 10; j++) + {{ + sorting_array[j] = moving_average_array[j]; + }} + if (i >= green_stable_time) + {{ + for (int j = 0; j < 6; j++) + {{ + for (int k = 0; k < (9 - j); k++) + {{ + if (sorting_array[k] > sorting_array[k + 1]) + {{ + temp_sort = sorting_array[k]; + sorting_array[k] = sorting_array[k + 1]; + sorting_array[k + 1] = temp_sort; + }} + }} + }} + moving_average = (sorting_array[4] / 2) + (sorting_array[5] / 2); + if ((val_1 > (moving_average * 0.9)) and (val_1 < (moving_average * 1.1))) + {{ + intensity_storage += val_1; + temp_counter++; + }} + }} + + if (intensity_display == 1) + {{ + // Serial.print("DAC_value : "); Serial.print(i); Serial.print('\t'); Serial.print('\t'); Serial.print("Green_Resistor_drop: "); Serial.print(val_2); + // Serial.print('\t'); Serial.print('\t'); Serial.print("PD_output: "); Serial.print(val_1); Serial.print('\t'); Serial.print('\t'); Serial.print("PD_2X_output: "); Serial.println(val_0); + }} + if (plotter == 1) + {{ + Serial.println(val_1); + }} + //delay(200); + }} + avg_greenS1 = intensity_storage / temp_counter; + delay(500); + + setOutput(0, GAIN_1, 1, 0); + setOutput(1, GAIN_1, 1, blue_dac); + memset (moving_average_array, 0, 10); + temp_counter = 0; + intensity_storage = 0; + for (int i = 0; i < blue_samples + blue_stable_time; i += 1) + {{ + + int16_t val_0 = ADS.readADC(0); + int16_t val_1 = ADS.readADC(1); + int16_t val_2 = ADS.readADC(2); + int16_t val_3 = ADS.readADC(3); + moving_average_array[i % 10] = val_1; + //Serial.println(moving_average_array[0]); + for (int j = 0; j < 10; j++) + {{ + sorting_array[j] = moving_average_array[j]; + }} + //Serial.println(sorting_array[0]); + if (i >= blue_stable_time) + {{ + for (int j = 0; j < 6; j++) + {{ + for (int k = 0; k < (9 - j); k++) + {{ + if (sorting_array[k] > sorting_array[k + 1]) + {{ + temp_sort = sorting_array[k]; + sorting_array[k] = sorting_array[k + 1]; + sorting_array[k + 1] = temp_sort; + }} + }} + }} + moving_average = (sorting_array[4] / 2) + (sorting_array[5] / 2); + if ((val_1 > (moving_average * 0.9)) and (val_1 < (moving_average * 1.1))) + {{ + intensity_storage += val_1; + + temp_counter++; + }} + }} + if (intensity_display == 1) + {{ + // Serial.print("DAC_value : "); Serial.print(i); Serial.print('\t'); Serial.print('\t'); Serial.print("Blue_Resistor_drop: "); Serial.print(val_3); + // Serial.print('\t'); Serial.print('\t'); Serial.print("PD_output: "); Serial.print(val_1); Serial.print('\t'); Serial.print('\t'); Serial.print("PD_2X_output: "); Serial.println(val_0); + }} + if (plotter == 1) + {{ + Serial.println(val_1); + }} + //delay(200); + }} + avg_blueS1 = intensity_storage / temp_counter; + + setOutput(0, GAIN_1, 1, 0); + setOutput(1, GAIN_1, 1, 0); +delay(100); + setOutput(1, GAIN_1, 1, 0); + setOutput(0, GAIN_1, 1, green_dac); + memset (moving_average_array, 0, 10); + temp_counter = 0; + intensity_storage = 0; + f = ADS.toVoltage(1); // voltage factor + for (int i = 0; i < green_samples + green_stable_time; i += 1) + {{ + + int16_t val_0 = ADS.readADC(0); + int16_t val_1 = ADS.readADC(1); + int16_t val_2 = ADS.readADC(2); + int16_t val_3 = ADS.readADC(3); + moving_average_array[i % 10] = val_1; + for (int j = 0; j < 10; j++) + {{ + sorting_array[j] = moving_average_array[j]; + }} + if (i >= green_stable_time) + {{ + for (int j = 0; j < 6; j++) + {{ + for (int k = 0; k < (9 - j); k++) + {{ + if (sorting_array[k] > sorting_array[k + 1]) + {{ + temp_sort = sorting_array[k]; + sorting_array[k] = sorting_array[k + 1]; + sorting_array[k + 1] = temp_sort; + }} + }} + }} + moving_average = (sorting_array[4] / 2) + (sorting_array[5] / 2); + if ((val_1 > (moving_average * 0.9)) and (val_1 < (moving_average * 1.1))) + {{ + intensity_storage += val_1; + temp_counter++; + }} + }} + + if (intensity_display == 1) + {{ + // Serial.print("DAC_value : "); Serial.print(i); Serial.print('\t'); Serial.print('\t'); Serial.print("Green_Resistor_drop: "); Serial.print(val_2); + // Serial.print('\t'); Serial.print('\t'); Serial.print("PD_output: "); Serial.print(val_1); Serial.print('\t'); Serial.print('\t'); Serial.print("PD_2X_output: "); Serial.println(val_0); + }} + if (plotter == 1) + {{ + Serial.println(val_1); + }} + //delay(200); + }} + avg_greenS2 = intensity_storage / temp_counter; + delay(500); + + setOutput(0, GAIN_1, 1, 0); + setOutput(1, GAIN_1, 1, blue_dac); + memset (moving_average_array, 0, 10); + temp_counter = 0; + intensity_storage = 0; + for (int i = 0; i < blue_samples + blue_stable_time; i += 1) + {{ + + int16_t val_0 = ADS.readADC(0); + int16_t val_1 = ADS.readADC(1); + int16_t val_2 = ADS.readADC(2); + int16_t val_3 = ADS.readADC(3); + moving_average_array[i % 10] = val_1; + //Serial.println(moving_average_array[0]); + for (int j = 0; j < 10; j++) + {{ + sorting_array[j] = moving_average_array[j]; + }} + //Serial.println(sorting_array[0]); + if (i >= blue_stable_time) + {{ + for (int j = 0; j < 6; j++) + {{ + for (int k = 0; k < (9 - j); k++) + {{ + if (sorting_array[k] > sorting_array[k + 1]) + {{ + temp_sort = sorting_array[k]; + sorting_array[k] = sorting_array[k + 1]; + sorting_array[k + 1] = temp_sort; + }} + }} + }} + moving_average = (sorting_array[4] / 2) + (sorting_array[5] / 2); + if ((val_1 > (moving_average * 0.9)) and (val_1 < (moving_average * 1.1))) + {{ + intensity_storage += val_1; + + temp_counter++; + }} + }} + if (intensity_display == 1) + {{ + // Serial.print("DAC_value : "); Serial.print(i); Serial.print('\t'); Serial.print('\t'); Serial.print("Blue_Resistor_drop: "); Serial.print(val_3); + // Serial.print('\t'); Serial.print('\t'); Serial.print("PD_output: "); Serial.print(val_1); Serial.print('\t'); Serial.print('\t'); Serial.print("PD_2X_output: "); Serial.println(val_0); + }} + if (plotter == 1) + {{ + Serial.println(val_1); + }} + //delay(200); + }} + avg_blueS2 = intensity_storage / temp_counter; + + setOutput(0, GAIN_1, 1, 0); + setOutput(1, GAIN_1, 1, 0); +delay(100); + setOutput(1, GAIN_1, 1, 0); + setOutput(0, GAIN_1, 1, green_dac); + memset (moving_average_array, 0, 10); + temp_counter = 0; + intensity_storage = 0; + f = ADS.toVoltage(1); // voltage factor + for (int i = 0; i < green_samples + green_stable_time; i += 1) + {{ + + int16_t val_0 = ADS.readADC(0); + int16_t val_1 = ADS.readADC(1); + int16_t val_2 = ADS.readADC(2); + int16_t val_3 = ADS.readADC(3); + moving_average_array[i % 10] = val_1; + for (int j = 0; j < 10; j++) + {{ + sorting_array[j] = moving_average_array[j]; + }} + if (i >= green_stable_time) + {{ + for (int j = 0; j < 6; j++) + {{ + for (int k = 0; k < (9 - j); k++) + {{ + if (sorting_array[k] > sorting_array[k + 1]) + {{ + temp_sort = sorting_array[k]; + sorting_array[k] = sorting_array[k + 1]; + sorting_array[k + 1] = temp_sort; + }} + }} + }} + moving_average = (sorting_array[4] / 2) + (sorting_array[5] / 2); + if ((val_1 > (moving_average * 0.9)) and (val_1 < (moving_average * 1.1))) + {{ + intensity_storage += val_1; + temp_counter++; + }} + }} + + if (intensity_display == 1) + {{ + // Serial.print("DAC_value : "); Serial.print(i); Serial.print('\t'); Serial.print('\t'); Serial.print("Green_Resistor_drop: "); Serial.print(val_2); + // Serial.print('\t'); Serial.print('\t'); Serial.print("PD_output: "); Serial.print(val_1); Serial.print('\t'); Serial.print('\t'); Serial.print("PD_2X_output: "); Serial.println(val_0); + }} + if (plotter == 1) + {{ + Serial.println(val_1); + }} + //delay(200); + }} + avg_greenS3 = intensity_storage / temp_counter; + delay(500); + + setOutput(0, GAIN_1, 1, 0); + setOutput(1, GAIN_1, 1, blue_dac); + memset (moving_average_array, 0, 10); + temp_counter = 0; + intensity_storage = 0; + for (int i = 0; i < blue_samples + blue_stable_time; i += 1) + {{ + + int16_t val_0 = ADS.readADC(0); + int16_t val_1 = ADS.readADC(1); + int16_t val_2 = ADS.readADC(2); + int16_t val_3 = ADS.readADC(3); + moving_average_array[i % 10] = val_1; + //Serial.println(moving_average_array[0]); + for (int j = 0; j < 10; j++) + {{ + sorting_array[j] = moving_average_array[j]; + }} + //Serial.println(sorting_array[0]); + if (i >= blue_stable_time) + {{ + for (int j = 0; j < 6; j++) + {{ + for (int k = 0; k < (9 - j); k++) + {{ + if (sorting_array[k] > sorting_array[k + 1]) + {{ + temp_sort = sorting_array[k]; + sorting_array[k] = sorting_array[k + 1]; + sorting_array[k + 1] = temp_sort; + }} + }} + }} + moving_average = (sorting_array[4] / 2) + (sorting_array[5] / 2); + if ((val_1 > (moving_average * 0.9)) and (val_1 < (moving_average * 1.1))) + {{ + intensity_storage += val_1; + + temp_counter++; + }} + }} + if (intensity_display == 1) + {{ + // Serial.print("DAC_value : "); Serial.print(i); Serial.print('\t'); Serial.print('\t'); Serial.print("Blue_Resistor_drop: "); Serial.print(val_3); + // Serial.print('\t'); Serial.print('\t'); Serial.print("PD_output: "); Serial.print(val_1); Serial.print('\t'); Serial.print('\t'); Serial.print("PD_2X_output: "); Serial.println(val_0); + }} + if (plotter == 1) + {{ + Serial.println(val_1); + }} + //delay(200); + }} + avg_blueS3 = intensity_storage / temp_counter; + + setOutput(0, GAIN_1, 1, 0); + setOutput(1, GAIN_1, 1, 0); + avg_greenS = (avg_greenS1 + avg_greenS2 + avg_greenS3) / 3; + avg_blueS = (avg_blueS1 + avg_blueS2 + avg_blueS3) / 3; + Serial.print("ok Green Intensity: "); Serial.println(avg_greenS); + Serial.print("ok Blue Intensity: "); Serial.println(avg_blueS); + Serial.println("#Sample Completed"); + delay(300); +}} diff --git a/Sample.ino b/Sample.ino new file mode 100644 index 0000000..c145924 --- /dev/null +++ b/Sample.ino @@ -0,0 +1,11 @@ + +void setup() {{ + // put your setup code here, to run once: + Serial.begin(115200); +}} + +void loop() {{ + // put your main code here, to run repeatedly: + + +}} \ No newline at end of file diff --git a/hemocube.py b/hemocube.py index 523c804..3c1d26a 100644 --- a/hemocube.py +++ b/hemocube.py @@ -68,7 +68,7 @@ void loop() {{ sketch += H("hello.h", """ void hello() { - Serial.println("hello smi7"); + Serial.println("HemoCube QC"); } """) @@ -171,6 +171,7 @@ if __name__ == "__main__": cb = QComboBox() cb.setFixedSize(QSize(150, 30)) ports = get_port() + cb.addItem("Select") for port in ports: cb.addItem(port) layout.addWidget(cb) @@ -178,6 +179,7 @@ if __name__ == "__main__": flash_port = "" def selectionchange(i): flash_port = cb.currentText() + print("flash_port", flash_port) cb.currentIndexChanged.connect(selectionchange) # Create a QPushButton object with a caption on it @@ -199,7 +201,7 @@ if __name__ == "__main__": # Close the application when the button is pressed # Here I am using slots & signals, which I will demonstrate later in this tutorial # qbtn.clicked.connect(lambda:addLabel(layout, "Flashing...")) - qbtn.clicked.connect(lambda:flash(w, line_edit_led1.text(), line_edit_led2.text(), flash_port)) + qbtn.clicked.connect(lambda: flash(w, line_edit_led1.text(), line_edit_led2.text(), cb.currentText())) window.setWindowTitle("HemoCube QC") window.setGeometry(400, 400, 800, 600)