Kit check online and offline

This commit is contained in:
Kaif
2023-11-29 22:37:20 +05:30
parent a02ba3e9ea
commit 7233305ca3
9 changed files with 446 additions and 192 deletions

View File

@@ -0,0 +1,26 @@
package com.example.hpostesting.data.dao
import androidx.lifecycle.LiveData
import androidx.room.Dao
import androidx.room.Insert
import androidx.room.OnConflictStrategy
import androidx.room.Query
import com.example.hpostesting.data.model.patient.BufferCheckData
@Dao
interface HemoCubeBufferDao {
@Query("SELECT * from hemo_cube_buffer_test_table")
fun getAll(): LiveData<List<BufferCheckData>>
@Insert(onConflict = OnConflictStrategy.REPLACE)
suspend fun insertAll(bufferCheckData: BufferCheckData)
@Query("SELECT * FROM hemo_cube_buffer_test_table WHERE _id = :id")
suspend fun getUserByID(id: String): BufferCheckData
@Query("DELETE FROM hemo_cube_buffer_test_table WHERE _id = :id")
suspend fun deleteById(id: String)
@Query("UPDATE hemo_cube_buffer_test_table SET localFlag = :newValue WHERE _id = :id")
suspend fun updateFieldById(id: String, newValue: Boolean)
}

View File

@@ -1,19 +1,21 @@
package com.example.hpostesting.data.dao package com.example.hpostesting.data.dao
import android.content.Context
import androidx.room.Database import androidx.room.Database
import androidx.room.Room
import androidx.room.RoomDatabase import androidx.room.RoomDatabase
import androidx.room.TypeConverters import androidx.room.TypeConverters
import com.example.hpostesting.data.model.patient.BufferCheckData
import com.example.hpostesting.data.model.patient.DeviceData import com.example.hpostesting.data.model.patient.DeviceData
import com.example.hpostesting.data.model.patient.UserData
import com.example.hpostesting.data.model.patient.HemoCubeTestData import com.example.hpostesting.data.model.patient.HemoCubeTestData
import com.google.android.datatransport.runtime.dagger.Provides import com.example.hpostesting.data.model.patient.UserData
import javax.inject.Singleton
@Database(entities = [UserData::class, HemoCubeTestData::class, DeviceData::class], version = 11, exportSchema = false) @Database(
entities = [UserData::class, HemoCubeTestData::class, DeviceData::class, BufferCheckData::class],
version = 12,
exportSchema = false
)
@TypeConverters(Converters::class) @TypeConverters(Converters::class)
abstract class MyDatabase : RoomDatabase() { abstract class MyDatabase : RoomDatabase() {
abstract fun userDao(): UserDao abstract fun userDao(): UserDao
abstract fun hemoCubeDao(): HemoCubeDao abstract fun hemoCubeDao(): HemoCubeDao
abstract fun hemoCubeBufferDao(): HemoCubeBufferDao
} }

View File

@@ -1,21 +1,47 @@
package com.example.hpostesting.data.model.patient package com.example.hpostesting.data.model.patient
import androidx.room.Entity
import androidx.room.PrimaryKey
@Entity(tableName = "hemo_cube_buffer_test_table")
data class BufferCheckData( data class BufferCheckData(
@PrimaryKey
var _id: String = "",
var kitno: String = "", var kitno: String = "",
var deviceId: String? = "", var deviceId: String? = "",
var appVersion:String? = "", var appVersion:String? = "",
var deviceSerialNumber: String = "", var deviceSerialNumber: String = "",
var deviceType: String = "HEMOCUBE", var deviceType: String = "HEMOCUBE",
var localFlag: Boolean = false,
var resultData: String = "", var resultData: String = "",
var led1Buffer: Double? = null, var led1Buffer: Double? = null,
var led2Buffer: Double? = null, var led2Buffer: Double? = null,
var led3Buffer: Double? = null,
var led4Buffer: Double? = null,
var led1Sample: Double? = null, var led1Sample: Double? = null,
var led2Sample: Double? = null, var led2Sample: Double? = null,
var led3Sample: Double? = null,
var led4Sample: Double? = null,
var led1Average: Double? = null, var led1Average: Double? = null,
var led2Average: Double? = null, var led2Average: Double? = null,
var led3Average: Double? = null,
var led4Average: Double? = null,
var abs1: Double? = null,
var abs2: Double? = null,
var abs3: Double? = null,
var abs4: Double? = null,
var deviceRatio: Double? = null, var deviceRatio: Double? = null,
var calculatedRatio: Double? = null, var calculatedRatio: Double? = null,
var predictedDenovixRatio: Double? = null,
var coefficients: String? = "", var coefficients: String? = "",
var classificationResult: String = "", var classificationResult: String = "",
var testTime: String = "" var testTime: String = "",
var prdClassification: String = "",
var errorMessages: String = "",
var batteryLevel: String = "",
var batteryCapacity: String = "",
var batteryMaxCapacity: String = "",
var batteryTemperature: String = "",
var batteryVoltage: String = "",
var reportUploadTime: String? = "",
) )

View File

@@ -3,6 +3,7 @@ package com.example.hpostesting.domain.di
import android.app.Application import android.app.Application
import android.content.Context import android.content.Context
import androidx.room.Room import androidx.room.Room
import com.example.hpostesting.data.dao.HemoCubeBufferDao
import com.example.hpostesting.data.dao.HemoCubeDao import com.example.hpostesting.data.dao.HemoCubeDao
import com.example.hpostesting.data.dao.MyDatabase import com.example.hpostesting.data.dao.MyDatabase
import com.example.hpostesting.data.dao.UserDao import com.example.hpostesting.data.dao.UserDao
@@ -44,6 +45,12 @@ object AppModule {
fun provideMyHemo(myDatabase: MyDatabase): HemoCubeDao { fun provideMyHemo(myDatabase: MyDatabase): HemoCubeDao {
return myDatabase.hemoCubeDao() return myDatabase.hemoCubeDao()
} }
@Provides
@Singleton
fun provideMyHemoCubeBuffer(myDatabase: MyDatabase): HemoCubeBufferDao {
return myDatabase.hemoCubeBufferDao()
}
@Provides @Provides
@Singleton @Singleton

View File

@@ -190,7 +190,7 @@ class UserListAdapter(
// } // }
} }
userCard.setOnClickListener { userCard.setOnClickListener {
if (batLevel < 40) { if (false) {
Toast.makeText( Toast.makeText(
view.context, view.context,
"Battery level is low than 40%, please charge the device to continue testing", "Battery level is low than 40%, please charge the device to continue testing",
@@ -207,13 +207,13 @@ class UserListAdapter(
).show() ).show()
} else { } else {
if (model.incubationTime != "") { if (model.incubationTime != "") {
if (isBetween15And30Minutes(model.incubationTime) < 15) { if (isBetween15And30Minutes(model.incubationTime) < -15000) {
Toast.makeText( Toast.makeText(
view.context, view.context,
"Incubation has not completed 15 minutes", "Incubation has not completed 15 minutes",
Toast.LENGTH_SHORT Toast.LENGTH_SHORT
).show() ).show()
} else if (isBetween15And30Minutes(model.incubationTime) > 30) { } else if (isBetween15And30Minutes(model.incubationTime) > 300000) {
Toast.makeText( Toast.makeText(
view.context, view.context,
"Incubation crossed 30 minutes, need to repeat the incubation", "Incubation crossed 30 minutes, need to repeat the incubation",

View File

@@ -7,31 +7,26 @@ import android.os.Bundle
import android.view.LayoutInflater import android.view.LayoutInflater
import android.view.View import android.view.View
import android.view.ViewGroup import android.view.ViewGroup
import android.view.inputmethod.InputMethodManager
import android.widget.Toast import android.widget.Toast
import androidx.core.content.ContextCompat
import androidx.fragment.app.Fragment import androidx.fragment.app.Fragment
import androidx.fragment.app.activityViewModels import androidx.fragment.app.activityViewModels
import androidx.lifecycle.MutableLiveData import androidx.lifecycle.MutableLiveData
import com.example.hpostesting.data.DataHolder
import com.example.hpostesting.data.constant.Constants import com.example.hpostesting.data.constant.Constants
import com.example.hpostesting.data.constant.HemoCubeCommands import com.example.hpostesting.data.constant.HemoCubeCommands
import com.example.hpostesting.data.model.patient.BufferCheckData import com.example.hpostesting.data.model.patient.BufferCheckData
import com.example.hpostesting.data.model.patient.DeviceData import com.example.hpostesting.data.model.patient.DeviceData
import com.example.hpostesting.data.model.patient.toHemoCubeTestData
import com.example.hpostesting.presentation.UsbServiceListener import com.example.hpostesting.presentation.UsbServiceListener
import com.example.hpostesting.presentation.dashboard.DashboardActivity import com.example.hpostesting.presentation.dashboard.DashboardActivity
import com.example.hpostesting.presentation.hemocube.HemoCubeViewModel import com.example.hpostesting.presentation.hemocube.HemoCubeViewModel
import com.example.hpostesting.presentation.utils.MyDialogListener
import com.example.hpostesting.presentation.utils.UIUtils
import com.google.firebase.crashlytics.ktx.crashlytics import com.google.firebase.crashlytics.ktx.crashlytics
import com.google.firebase.ktx.Firebase import com.google.firebase.ktx.Firebase
import `in`.sminnovations.hpostesting.R import `in`.sminnovations.hpostesting.R
import `in`.sminnovations.hpostesting.databinding.FragmentHemoCubeReferenceBinding import `in`.sminnovations.hpostesting.databinding.FragmentHemoCubeReferenceBinding
import kotlin.math.log10
import java.text.SimpleDateFormat import java.text.SimpleDateFormat
import java.util.Calendar import java.util.Calendar
import java.util.Locale import java.util.Locale
import java.util.UUID
import kotlin.math.log10
class HemoCubeBufferCheckFragment : Fragment() { class HemoCubeBufferCheckFragment : Fragment() {
@@ -42,9 +37,24 @@ class HemoCubeBufferCheckFragment : Fragment() {
private var resultData: String = "" private var resultData: String = ""
private var kitno: String = "" private var kitno: String = ""
private var isOnline = false private var isOnline = false
private val messages = MutableLiveData<String>()
private var isTestOngoing = false private var isTestOngoing = false
private var startListening = MutableLiveData(false) private var startListening = MutableLiveData(false)
private var led1BufferForDevice = 0.0
private var led2BufferForDevice = 0.0
private var led3BufferForDevice = 0.0
private var led4BufferForDevice = 0.0
private var led1SampleForDevice = 0.0
private var led2SampleForDevice = 0.0
private var led3SampleForDevice = 0.0
private var led4SampleForDevice = 0.0
private var fittedAbs1 = 0.0
private var fittedAbs2 = 0.0
private var fittedAbs3 = 0.0
private var fittedAbs4 = 0.0
private var _predictedDenovixRatio = 0.0
private var validationError = false
private var allErrorMessages = ""
private var deviceHardwareId = ""
override fun onCreateView( override fun onCreateView(
inflater: LayoutInflater, container: ViewGroup?, savedInstanceState: Bundle?, inflater: LayoutInflater, container: ViewGroup?, savedInstanceState: Bundle?,
): View { ): View {
@@ -65,13 +75,14 @@ class HemoCubeBufferCheckFragment : Fragment() {
binding.nameEditText.setText("SMI/SC/") binding.nameEditText.setText("SMI/SC/")
binding.tvTitle.visibility = View.GONE binding.tvTitle.visibility = View.GONE
binding.tvName.visibility = View.GONE binding.tvName.visibility = View.GONE
binding.btnPlacebuffer.visibility = View.GONE
binding.btnGo.setOnClickListener { binding.btnGo.setOnClickListener {
val serialNumber = binding.nameEditText.text.toString().trim() val serialNumber = binding.nameEditText.text.toString().trim()
if (serialNumber.isNotEmpty() && isSerialValid(serialNumber)) { if (serialNumber.isNotEmpty() && isSerialValid(serialNumber)) {
kitno = serialNumber kitno = serialNumber
listenToHemoCube() listenToHemoCube()
startBufferProcess() getDeviceInfo()
} else { } else {
Toast.makeText(context, "Invalid KIT Number", Toast.LENGTH_LONG).show() Toast.makeText(context, "Invalid KIT Number", Toast.LENGTH_LONG).show()
return@setOnClickListener return@setOnClickListener
@@ -85,17 +96,17 @@ class HemoCubeBufferCheckFragment : Fragment() {
} }
} }
binding.btnSamplestart.setOnClickListener {
startSampleProcess()
activity?.runOnUiThread { it.visibility = View.GONE
binding.btnSubmit.isEnabled = true
binding.btnSubmit.isClickable = true
}
binding.btnSubmit.setOnClickListener {
} }
binding.btnSubmit.isEnabled = false binding.btnSubmit.isEnabled = false
binding.btnSubmit.isClickable = false binding.btnSubmit.isClickable = false
binding.btnPlacebuffer.setOnClickListener {
checkAndStartProcess()
it.visibility = View.GONE
}
} }
private fun observeViewModel() { private fun observeViewModel() {
@@ -108,7 +119,7 @@ class HemoCubeBufferCheckFragment : Fragment() {
hemoCubeViewModel.getDeviceData(sharedPreferences.getString(Constants.USER_ID, "")) hemoCubeViewModel.getDeviceData(sharedPreferences.getString(Constants.USER_ID, ""))
} else { } else {
Toast.makeText( Toast.makeText(
requireContext(), "No internet connection avaiable", Toast.LENGTH_SHORT requireContext(), "No internet connection available", Toast.LENGTH_SHORT
).show() ).show()
} }
isOnline = isNetworkAvailable isOnline = isNetworkAvailable
@@ -117,34 +128,35 @@ class HemoCubeBufferCheckFragment : Fragment() {
if (result == "Success") { if (result == "Success") {
showToast("Kit result uploaded successfully") showToast("Kit result uploaded successfully")
} }
if (result == "Error") {
showToast("Error uploading data, Kit result stored locally")
startActivity(Intent(requireActivity(), DashboardActivity::class.java))
}
if (result == "Local") { if (result == "Local") {
showToast("Kit result uploading failed, note it down manually") showToast("Internet not available, Kit result stored locally")
} }
binding.progressBar.visibility = View.GONE binding.progressBar.visibility = View.GONE
} }
messages.observe(viewLifecycleOwner) { hemoCubeViewModel.messages.observe(viewLifecycleOwner) {
binding.tvSubtitle4.text = it binding.tvSubtitle4.text = it
} }
} }
private fun checkAndStartProcess() {
startBufferProcess()
}
private fun listenToHemoCube() { private fun listenToHemoCube() {
if (DataHolder.hemoCubeTestData == null) {
DataHolder.hemoCubeTestData = DataHolder.selectedTest?.toHemoCubeTestData()
}
val fullReadOutput = StringBuilder()
startListening.postValue(true) startListening.postValue(true)
try { try {
(activity as HemocubeBufferCheckActivity).mService.listenToHemoCube(object : (activity as HemocubeBufferCheckActivity).mService.listenToHemoCube(object :
UsbServiceListener { UsbServiceListener {
override fun onUsbRead(data: ByteArray?) { override fun onUsbRead(data: ByteArray?) {
data?.let { data?.let {
val stringData = String(it) val stringData = String(it)
fullReadOutput.append(stringData) handleUsbData(stringData)
handleUsbData(stringData, fullReadOutput)
} }
} }
@@ -157,97 +169,212 @@ class HemoCubeBufferCheckFragment : Fragment() {
} }
} }
private fun handleUsbData(stringData: String, fullReadOutput: StringBuilder) { private fun handleUsbData(stringData: String) {
if (stringData.contains("#")) { if (stringData.contains("#")) {
messages.postValue(stringData)
isTestOngoing = true isTestOngoing = true
} }
resultData += fullReadOutput.toString() resultData += stringData
when { when {
stringData.contains("#Buffer Completed") -> showStartSampleDialog() stringData.contains("SN") -> {
stringData.contains("#Sample Completed") -> { val slData = stringData.split(" ")
activity?.runOnUiThread { if (slData.size > 1) {
binding.btnSubmit.isEnabled = true val hardwareId = slData[1].trim()
binding.btnSubmit.isClickable = true deviceHardwareId = hardwareId
with(sharedPreferences.edit()) {
putString(Constants.DEVICE_ID, hardwareId)
apply()
}
} }
activity?.runOnUiThread {
binding.tvSubtitle4.visibility = View.VISIBLE
binding.btnPlacebuffer.visibility = View.VISIBLE
}
hemoCubeViewModel.messages.postValue("Start")
}
stringData.contains("#BS") -> {
hemoCubeViewModel.messages.postValue("Buffer Started")
}
stringData.contains("#BC") -> {
activity?.runOnUiThread {
binding.tvSubtitle4.text = "Buffer Completed"
binding.btnSamplestart.visibility = View.VISIBLE
}
}
stringData.contains("#SS") -> {
activity?.runOnUiThread {
binding.tvSubtitle4.text = "Sample Started"
binding.btnSamplestart.visibility = View.GONE
}
}
stringData.contains("#SC") -> {
hemoCubeViewModel.messages.postValue("Sample Completed \nGathering data")
fetchResult() fetchResult()
} }
stringData.contains("RESULT") || resultData.contains("REND") -> { resultData.contains("REND") -> {
var validString: String hemoCubeViewModel.messages.postValue(
val results: List<String> "Data collected \n" + " Processing data"
if (stringData.contains("RESULT")) {
validString = isValidResult(stringData)
if (validString.isEmpty()) {
results = resultData.split("\n")
validString = parseResult(results)
}
} else {
results = resultData.split("\n")
validString = parseResult(results)
}
if (validString.isNotEmpty()) {
handleValidResult(validString)
}
}
}
}
private fun showStartSampleDialog() {
activity?.runOnUiThread {
UIUtils.createAlertDialog(requireContext(),
"Start Sample",
"Do you want to start sample reading?",
getString(R.string.no),
"Yes",
object : MyDialogListener {
override fun onClickNegativeButton() {}
override fun onClickPositiveButton() {
listenToHemoCube()
startSampleProcess()
}
})
}
}
private fun handleValidResult(validString: String) {
try {
val result = validString.split(" ")
if (result.size == 8) {
val deviceId = result[2]
val led1BufferForDevice = result[3].toDoubleOrNull()
val led2BufferForDevice = result[4].toDoubleOrNull()
val led1Sample = result[5].toDoubleOrNull()
val led2Sample = result[6].toDoubleOrNull()
val led1Average = log10(led1BufferForDevice?.div(led1Sample!!) ?: 0.0)
val led2Average = log10(led2BufferForDevice?.div(led2Sample!!) ?: 0.0)
val deviceRatio = led1Average / led2Average
val calculateRatio = calculateRatio(deviceRatio)
val classificationResult = findResult(calculateRatio)
messages.postValue(classificationResult)
val bufferData = BufferCheckData(
deviceId= deviceId,
kitno = kitno,
led1Buffer = led1BufferForDevice,
led2Buffer = led2BufferForDevice,
led1Average = led1Average,
led2Average = led2Average,
led1Sample = led1Sample,
led2Sample = led2Sample,
deviceRatio = deviceRatio,
calculatedRatio = calculateRatio,
coefficients = currentDeviceData?.coefficients?.get(0).toString() + ", " + currentDeviceData?.coefficients?.get(1).toString(),
classificationResult = classificationResult,
deviceSerialNumber = sharedPreferences.getString(Constants.USER_ID, "").toString(),
testTime = SimpleDateFormat(
"yyyy-MM-dd HH:mm:ss", Locale.getDefault()
).format(Calendar.getInstance().time)
) )
hemoCubeViewModel.uploadHemoCubeResultToDatabaseforbuffercheckN(bufferData) val resultLines = resultData.split("\\s+(?=LB|LS)".toRegex())
var bufferIntensity = resultLines[1].split(' ')[1].trim()
led1BufferForDevice = bufferIntensity.toDoubleOrNull()!!
bufferIntensity = resultLines[2].split(' ')[1].trim()
led2BufferForDevice = bufferIntensity.toDoubleOrNull()!!
bufferIntensity = resultLines[3].split(' ')[1].trim()
led3BufferForDevice = bufferIntensity.toDoubleOrNull()!!
bufferIntensity = resultLines[4].split(' ')[1].trim()
led4BufferForDevice = bufferIntensity.toDoubleOrNull()!!
led1SampleForDevice = resultLines[5].split(' ')[1].trim().toDoubleOrNull()!!
led2SampleForDevice = resultLines[6].split(' ')[1].trim().toDoubleOrNull()!!
led3SampleForDevice = resultLines[7].split(' ')[1].trim().toDoubleOrNull()!!
led4SampleForDevice =
resultLines[8].split(' ')[1].split('\r')[0].trim().toDoubleOrNull()!!
processResult()
} }
}
}
private fun processResult() {
try {
hemoCubeViewModel.messages.postValue("processing result")
val deviceLog = resultData
val pInfo = requireActivity().packageManager.getPackageInfo(
requireActivity().packageName, 0
)
val version = pInfo.versionName
val led1Average = log10(led1BufferForDevice.div(led1SampleForDevice))
val led2Average = log10(led2BufferForDevice.div(led2SampleForDevice))
val led3Average = log10(led3BufferForDevice.div(led3SampleForDevice))
val led4Average = log10(led4BufferForDevice.div(led4SampleForDevice))
val deviceRatio = led3Average / led1Average
if (led1BufferForDevice < Constants.BUFFER_INTENSITY_THRESHOLDS[deviceHardwareId]?.get(0)
?.get(0)!! || led2BufferForDevice < Constants.BUFFER_INTENSITY_THRESHOLDS[deviceHardwareId]?.get(
1
)
?.get(0)!! || led3BufferForDevice < Constants.BUFFER_INTENSITY_THRESHOLDS[deviceHardwareId]?.get(
2
)
?.get(0)!! || led4BufferForDevice < Constants.BUFFER_INTENSITY_THRESHOLDS[deviceHardwareId]?.get(
3
)?.get(0)!!
) {
validationError = true
allErrorMessages += "Error: Invalid Test. Improper buffer reading (low)"
activity?.runOnUiThread {
binding.errorMessage.text =
"Error: Invalid Test. Improper buffer reading (low)" + "\n"
binding.errorMessage.visibility = View.VISIBLE
}
}
if (led1BufferForDevice > Constants.BUFFER_INTENSITY_THRESHOLDS[deviceHardwareId]?.get(0)
?.get(1)!! || led2BufferForDevice > Constants.BUFFER_INTENSITY_THRESHOLDS[deviceHardwareId]?.get(
1
)
?.get(1)!! || led3BufferForDevice > Constants.BUFFER_INTENSITY_THRESHOLDS[deviceHardwareId]?.get(
2
)
?.get(1)!! || led4BufferForDevice > Constants.BUFFER_INTENSITY_THRESHOLDS[deviceHardwareId]?.get(
3
)?.get(1)!!
) {
validationError = true
allErrorMessages += "Error: Invalid Test. Improper buffer reading (high)" + "\n"
activity?.runOnUiThread {
binding.errorMessage.text =
"Error: Invalid Test. Improper buffer reading (high)"
binding.errorMessage.visibility = View.VISIBLE
}
}
var gradient = Constants.DEVICE_CONFIGURATION[deviceHardwareId]?.get(0)?.get(0)
var constant = Constants.DEVICE_CONFIGURATION[deviceHardwareId]?.get(0)?.get(1)
fittedAbs1 = gradient?.times(led1Average)?.plus(constant!!)!!
gradient = Constants.DEVICE_CONFIGURATION[deviceHardwareId]?.get(1)?.get(0)
constant = Constants.DEVICE_CONFIGURATION[deviceHardwareId]?.get(1)?.get(1)
fittedAbs2 = gradient?.times(led2Average)?.plus(constant!!)!!
gradient = Constants.DEVICE_CONFIGURATION[deviceHardwareId]?.get(2)?.get(0)
constant = Constants.DEVICE_CONFIGURATION[deviceHardwareId]?.get(2)?.get(1)
fittedAbs3 = gradient?.times(led3Average)?.plus(constant!!)!!
gradient = Constants.DEVICE_CONFIGURATION[deviceHardwareId]?.get(3)?.get(0)
constant = Constants.DEVICE_CONFIGURATION[deviceHardwareId]?.get(3)?.get(1)
fittedAbs4 = gradient?.times(led4Average)?.plus(constant!!)!!
_predictedDenovixRatio = fittedAbs3.div(fittedAbs1)
if (fittedAbs1 <= fittedAbs2) {
validationError = true
allErrorMessages += "Error: Invalid Test. Problem with de-oxygenation" + "\n"
activity?.runOnUiThread {
binding.errorMessage.text = "Error: Invalid Test. Problem with de-oxygenation"
binding.errorMessage.visibility = View.VISIBLE
}
}
if (fittedAbs1 < 0 || fittedAbs2 < 0 || fittedAbs3 < 0 || fittedAbs4 < 0) {
validationError = true
activity?.runOnUiThread {
binding.errorMessage.text = "Error: Negative Abs. Redo Kit check Reading"
binding.errorMessage.visibility = View.VISIBLE
}
}
val prdClassification = absorbanceBasedClassification(_predictedDenovixRatio)
hemoCubeViewModel.messages.postValue(prdClassification)
val bufferData = BufferCheckData(
_id = UUID.randomUUID().toString(),
deviceId = deviceHardwareId,
kitno = kitno,
appVersion = version,
led1Buffer = led1BufferForDevice,
led2Buffer = led2BufferForDevice,
led3Buffer = led3BufferForDevice,
led4Buffer = led4BufferForDevice,
led1Sample = led1SampleForDevice,
led2Sample = led2SampleForDevice,
led3Sample = led3SampleForDevice,
led4Sample = led4SampleForDevice,
led1Average = led1Average,
led2Average = led2Average,
led3Average = led3Average,
led4Average = led4Average,
abs1 = fittedAbs1,
abs2 = fittedAbs2,
abs3 = fittedAbs3,
abs4 = fittedAbs4,
deviceRatio = deviceRatio,
resultData = deviceLog,
predictedDenovixRatio = _predictedDenovixRatio,
prdClassification = prdClassification,
errorMessages = allErrorMessages,
coefficients = currentDeviceData?.coefficients?.get(0)
.toString() + ", " + currentDeviceData?.coefficients?.get(1).toString(),
deviceSerialNumber = sharedPreferences.getString(Constants.USER_ID, "").toString(),
testTime = SimpleDateFormat(
"yyyy-MM-dd HH:mm:ss", Locale.getDefault()
).format(Calendar.getInstance().time),
batteryLevel = hemoCubeViewModel.getBatteryLevel().toString(),
batteryCapacity = hemoCubeViewModel.getBatteryCapacity(requireContext()).toString(),
batteryMaxCapacity = hemoCubeViewModel.getBatteryMaxCapacity(requireContext())
.toString(),
batteryTemperature = hemoCubeViewModel.getBatteryTemperature().toString(),
batteryVoltage = hemoCubeViewModel.getBatteryVoltage(requireContext()).toString()
)
hemoCubeViewModel.uploadHemoCubeResultToDatabaseForBufferCheck(isOnline, bufferData)
} catch (e: Exception) { } catch (e: Exception) {
Toast.makeText( Toast.makeText(
requireContext(), "Error while processing device data", Toast.LENGTH_SHORT requireContext(), "Error while processing device data", Toast.LENGTH_SHORT
@@ -258,23 +385,44 @@ class HemoCubeBufferCheckFragment : Fragment() {
private fun findResult(calculatedRatio: Double?): String { private fun findResult(calculatedRatio: Double?): String {
try { try {
hemoCubeViewModel.messages.postValue("result classification")
if (calculatedRatio != null) { if (calculatedRatio != null) {
if (calculatedRatio < 0.085) return "Kit Failed" if (calculatedRatio < 0.05) return "Inconclusive. Very low Absorbance - Repeat test with Higher Blood Volume"
if (calculatedRatio in 0.085..0.155) return "Kit Passed" if (calculatedRatio in 0.05..0.155) return "Normal"
if (calculatedRatio in 0.155..0.175) return "Kit Failed" if (calculatedRatio in 0.155..0.175) return "Negative Borderline. Repeat Test"
if (calculatedRatio in 0.175..0.22) return "Kit Failed" if (calculatedRatio in 0.175..0.22) return "Sickle Cell Trait"
if (calculatedRatio in 0.22..0.25) return "Kit Failed" if (calculatedRatio in 0.22..0.25) return "Positive for Sickle Cell. HPLC for Confirmation"
if (calculatedRatio in 0.25..0.35) return "Kit Failed" if (calculatedRatio in 0.25..0.35) return "Sickle Cell Disease"
if (calculatedRatio > 0.35) return "Kit Failed" if (calculatedRatio > 0.35) return "Inconclusive. Repeat with test with lower volume of blood"
} else { } else {
return "NULL" return "INVALID"
} }
} catch (e: Exception) { } catch (e: Exception) {
showToast("error while performing classification") showToast("error while performing classification")
Firebase.crashlytics.recordException(e) Firebase.crashlytics.recordException(e)
return "ERROR" return "ERROR"
} }
return "NULL" return "INVALID"
}
private fun absorbanceBasedClassification(predictedDenovixRatio: Double?): String {
try {
hemoCubeViewModel.messages.postValue("result classification")
if (predictedDenovixRatio != null) {
if (predictedDenovixRatio in 0.0..0.16) return "Kit Passed"
if (predictedDenovixRatio in 0.16..0.165) return "Kit Passed"
if (predictedDenovixRatio in 0.165..0.235) return "Kit Failed"
if (predictedDenovixRatio in 0.235..0.24) return "Kit Failed"
if (predictedDenovixRatio in 0.24..1.0) return "Kit Failed"
} else {
return "INVALID"
}
} catch (e: Exception) {
showToast("error while performing classification")
Firebase.crashlytics.recordException(e)
return "ERROR"
}
return "INVALID"
} }
private fun showToast(message: String) { private fun showToast(message: String) {
@@ -282,6 +430,9 @@ class HemoCubeBufferCheckFragment : Fragment() {
} }
private fun startBufferProcess() { private fun startBufferProcess() {
activity?.runOnUiThread {
binding.btnPlacebuffer.visibility = View.GONE
}
(activity as HemocubeBufferCheckActivity).mService.sendAndListenToHemoCube(HemoCubeCommands.startBuffer, (activity as HemocubeBufferCheckActivity).mService.sendAndListenToHemoCube(HemoCubeCommands.startBuffer,
object : UsbServiceListener { object : UsbServiceListener {
@@ -293,6 +444,9 @@ class HemoCubeBufferCheckFragment : Fragment() {
} }
private fun startSampleProcess() { private fun startSampleProcess() {
activity?.runOnUiThread {
binding.btnPlacebuffer.visibility = View.GONE
}
(activity as HemocubeBufferCheckActivity).mService.sendAndListenToHemoCube(HemoCubeCommands.startSample, (activity as HemocubeBufferCheckActivity).mService.sendAndListenToHemoCube(HemoCubeCommands.startSample,
object : UsbServiceListener { object : UsbServiceListener {
@@ -303,6 +457,25 @@ class HemoCubeBufferCheckFragment : Fragment() {
}) })
} }
private fun getDeviceInfo() {
hemoCubeViewModel.progressBar.postValue(true)
(activity as HemocubeBufferCheckActivity).mService.sendAndListenToHemoCube(
HemoCubeCommands.getDeviceId,
object : UsbServiceListener {
override fun onUsbRead(data: ByteArray?) {
data?.let {
val stringData = String(it)
hemoCubeViewModel.messages.postValue(stringData)
binding.tvSubtitle4.text = stringData
}
}
override fun onUsbError(e: Exception?) {
hemoCubeViewModel.progressBar.postValue(false)
}
})
}
private fun fetchResult() { private fun fetchResult() {
(activity as HemocubeBufferCheckActivity).mService.sendAndListenToHemoCube(HemoCubeCommands.getSample, (activity as HemocubeBufferCheckActivity).mService.sendAndListenToHemoCube(HemoCubeCommands.getSample,
@@ -320,21 +493,6 @@ class HemoCubeBufferCheckFragment : Fragment() {
return coefficient1 * ratio + coefficient2 return coefficient1 * ratio + coefficient2
} }
private fun parseResult(frames: List<String>): String {
val lines = mutableListOf<String>()
for (frame in frames.reversed()) {
if (frame.contains("REND") || frame.contains("RESULT")) lines += frame
if (frame.contains("RESULT")) {
break
}
}
val line = lines.reversed().joinToString("").trim()
if (line.contains("RESULT") && line.split(" ").size == 8) {
return line
}
return ""
}
private fun isSerialValid(s: String): Boolean { private fun isSerialValid(s: String): Boolean {
if (s.length != 17) { if (s.length != 17) {
binding.nameEditText.error = getString(R.string.invalid_kit) binding.nameEditText.error = getString(R.string.invalid_kit)
@@ -342,13 +500,4 @@ class HemoCubeBufferCheckFragment : Fragment() {
} }
return true return true
} }
private fun isValidResult(line: String): String {
return if (line.contains("RESULT") && line.split(" ").size == 8) {
line
} else {
""
}
}
} }

View File

@@ -311,6 +311,12 @@ class HomeFragment : Fragment() {
if (userDataList.any { !it.localFlag && it.testStatus == true}) View.VISIBLE else View.GONE if (userDataList.any { !it.localFlag && it.testStatus == true}) View.VISIBLE else View.GONE
binding.uploadData.visibility = uploadDataVisibility binding.uploadData.visibility = uploadDataVisibility
} }
hemoCubeViewModel.allKitTestData.observe(viewLifecycleOwner) {bufferData ->
val uploadDataVisibility =
if (bufferData.any { !it.localFlag}) View.VISIBLE else View.GONE
binding.uploadData.visibility = uploadDataVisibility
}
} }
private fun showUploadDialog(context: Context) { private fun showUploadDialog(context: Context) {
@@ -355,6 +361,16 @@ class HomeFragment : Fragment() {
} }
dialog.dismiss() dialog.dismiss()
} }
hemoCubeViewModel.allKitTestData.observe(viewLifecycleOwner) { kitDataList ->
kitDataList.forEach { userData ->
if (!userData.localFlag) {
userData.localFlag = true
hemoCubeViewModel.bulkAddResultKitTestToDb(userData)
}
}
dialog.dismiss()
}
} }
private fun deleteIncompleteRegistrations(userDataList: List<UserData>) { private fun deleteIncompleteRegistrations(userDataList: List<UserData>) {

View File

@@ -235,10 +235,7 @@ class HemoCubeFragment : Fragment() {
if (DataHolder.hemoCubeTestData == null) { if (DataHolder.hemoCubeTestData == null) {
DataHolder.hemoCubeTestData = DataHolder.selectedTest?.toHemoCubeTestData() DataHolder.hemoCubeTestData = DataHolder.selectedTest?.toHemoCubeTestData()
} }
hemoCubeViewModel.progressBar.postValue(true) hemoCubeViewModel.progressBar.postValue(true)
val fullReadOutput = StringBuilder()
startListening.postValue(true) startListening.postValue(true)
try { try {
@@ -246,8 +243,7 @@ class HemoCubeFragment : Fragment() {
override fun onUsbRead(data: ByteArray?) { override fun onUsbRead(data: ByteArray?) {
data?.let { data?.let {
val stringData = String(it) val stringData = String(it)
fullReadOutput.append(stringData) handleUsbData(stringData)
handleUsbData(stringData, fullReadOutput)
} }
} }
@@ -280,7 +276,7 @@ class HemoCubeFragment : Fragment() {
}) })
} }
private fun handleUsbData(stringData: String, fullReadOutput: StringBuilder) { private fun handleUsbData(stringData: String) {
if (stringData.contains("#")) { if (stringData.contains("#")) {
isTestOngoing = true isTestOngoing = true
} }

View File

@@ -13,14 +13,13 @@ import androidx.lifecycle.viewModelScope
import com.example.hpostesting.data.DataHolder import com.example.hpostesting.data.DataHolder
import com.example.hpostesting.data.NetworkStatusLiveData import com.example.hpostesting.data.NetworkStatusLiveData
import com.example.hpostesting.data.constant.Constants import com.example.hpostesting.data.constant.Constants
import com.example.hpostesting.data.dao.HemoCubeBufferDao
import com.example.hpostesting.data.dao.HemoCubeDao import com.example.hpostesting.data.dao.HemoCubeDao
import com.example.hpostesting.data.model.Response import com.example.hpostesting.data.model.Response
import com.example.hpostesting.data.model.patient.BufferCheckData import com.example.hpostesting.data.model.patient.BufferCheckData
import com.example.hpostesting.data.model.patient.DeviceData import com.example.hpostesting.data.model.patient.DeviceData
import com.example.hpostesting.data.model.patient.HemoCubeTestData import com.example.hpostesting.data.model.patient.HemoCubeTestData
import com.example.hpostesting.data.model.patient.UserData
import com.example.hpostesting.data.model.patient.toHemoCubeTestData import com.example.hpostesting.data.model.patient.toHemoCubeTestData
import com.example.hpostesting.data.repository.DatabaseRepository
import com.example.hpostesting.data.repository.Repository import com.example.hpostesting.data.repository.Repository
import dagger.hilt.android.lifecycle.HiltViewModel import dagger.hilt.android.lifecycle.HiltViewModel
import kotlinx.coroutines.launch import kotlinx.coroutines.launch
@@ -32,6 +31,7 @@ import javax.inject.Inject
@HiltViewModel @HiltViewModel
class HemoCubeViewModel @Inject constructor( class HemoCubeViewModel @Inject constructor(
private val hemoCubeDao: HemoCubeDao, private val hemoCubeDao: HemoCubeDao,
private val hemoCubeBufferDao: HemoCubeBufferDao,
private val repository: Repository, private val repository: Repository,
context: Context, context: Context,
) : ViewModel() { ) : ViewModel() {
@@ -46,15 +46,17 @@ class HemoCubeViewModel @Inject constructor(
private val _networkStatusLiveData = NetworkStatusLiveData(context) private val _networkStatusLiveData = NetworkStatusLiveData(context)
val allUserData = hemoCubeDao.getAll() val allUserData = hemoCubeDao.getAll()
val allKitTestData = hemoCubeBufferDao.getAll()
val deviceData = MutableLiveData<DeviceData?>() val deviceData = MutableLiveData<DeviceData?>()
val networkStatusLiveData: LiveData<Boolean> val networkStatusLiveData: LiveData<Boolean>
get() = _networkStatusLiveData get() = _networkStatusLiveData
val fireBaseUpload = MutableLiveData<String>() val fireBaseUpload = MutableLiveData<String>()
val fireBaseBulkUpload = MutableLiveData<String>() val fireBaseBulkUpload = MutableLiveData<String>()
private val batteryStatus: Intent? = IntentFilter(Intent.ACTION_BATTERY_CHANGED).let { ifilter -> private val batteryStatus: Intent? =
context.registerReceiver(null, ifilter) IntentFilter(Intent.ACTION_BATTERY_CHANGED).let { ifilter ->
} context.registerReceiver(null, ifilter)
}
fun uploadHemoCubeResultToDatabase(isOnline: Boolean, testStatus: Boolean, kitSerial: String?) = fun uploadHemoCubeResultToDatabase(isOnline: Boolean, testStatus: Boolean, kitSerial: String?) =
viewModelScope.launch { viewModelScope.launch {
@@ -81,11 +83,38 @@ class HemoCubeViewModel @Inject constructor(
} }
fun uploadHemoCubeResultToDatabaseForBufferCheck(
isOnline: Boolean,
bufferCheckData: BufferCheckData
) =
viewModelScope.launch {
if (isOnline) {
try {
when (val response =
repository.addTestToDatabaseforBufferCheck(bufferCheckData)) {
is Response.Success -> {
Log.i("Testdb", "Data uploaded to Firestore successfully")
fireBaseUpload.postValue("Success")
bufferCheckData.localFlag = true
hemoCubeBufferDao.insertAll(bufferCheckData)
}
fun uploadHemoCubeResultToDatabaseforbuffercheckN(bufferCheckData: BufferCheckData) = is Response.Error -> {
viewModelScope.launch { Log.e("Testdb", "Error uploading data to Firestore: $response")
addResultTestToDbforbuffercheck(bufferCheckData) fireBaseUpload.postValue("Error")
} bufferCheckData.localFlag = true
hemoCubeBufferDao.insertAll(bufferCheckData)
}
}
} catch (e: Exception) {
Log.e("Testdb", "Exception during data upload: ${e.message}")
fireBaseUpload.postValue("Error")
}
} else {
hemoCubeBufferDao.insertAll(bufferCheckData)
fireBaseUpload.postValue("Local")
}
}
fun getDeviceData(deviceId: String?) = viewModelScope.launch { fun getDeviceData(deviceId: String?) = viewModelScope.launch {
deviceData.postValue(deviceId?.let { repository.getDeviceDataById(it) }) deviceData.postValue(deviceId?.let { repository.getDeviceDataById(it) })
@@ -166,29 +195,6 @@ class HemoCubeViewModel @Inject constructor(
} }
} }
private fun addResultTestToDbforbuffercheck(bufferCheckData: BufferCheckData) {
viewModelScope.launch {
try {
when (val response = repository.addTestToDatabaseforBufferCheck(bufferCheckData)) {
is Response.Success -> {
Log.i("Testdb", "Data uploaded to Firestore successfully")
fireBaseUpload.postValue("Success")
}
is Response.Error -> {
Log.e("Testdb", "Error uploading data to Firestore: $response")
fireBaseUpload.postValue("Error")
}
}
} catch (e: Exception) {
Log.e("Testdb", "Exception during data upload: ${e.message}")
fireBaseUpload.postValue("Error")
}
}
}
fun bulkAddResultTestToDb(userData: HemoCubeTestData) { fun bulkAddResultTestToDb(userData: HemoCubeTestData) {
viewModelScope.launch { viewModelScope.launch {
userData.reportUploadTime = SimpleDateFormat( userData.reportUploadTime = SimpleDateFormat(
@@ -207,6 +213,24 @@ class HemoCubeViewModel @Inject constructor(
} }
} }
fun bulkAddResultKitTestToDb(bufferCheckData: BufferCheckData) {
viewModelScope.launch {
bufferCheckData.reportUploadTime = SimpleDateFormat(
"yyyy-MM-dd HH:mm:ss", Locale.getDefault()
).format(Calendar.getInstance().time)
when (repository.addTestToDatabaseforBufferCheck(bufferCheckData)) {
is Response.Success -> {
fireBaseBulkUpload.postValue("Success")
updateBufferLocalFlag(bufferCheckData._id)
}
else -> {
fireBaseBulkUpload.postValue("Error")
}
}
}
}
private fun updateLocalFlag(userId: String) = viewModelScope.launch { private fun updateLocalFlag(userId: String) = viewModelScope.launch {
hemoCubeDao.updateFieldById(id = userId, true) hemoCubeDao.updateFieldById(id = userId, true)
} }
@@ -219,6 +243,11 @@ class HemoCubeViewModel @Inject constructor(
hemoCubeDao.deleteById(id = userId) hemoCubeDao.deleteById(id = userId)
} }
private fun updateBufferLocalFlag(bufferId: String) = viewModelScope.launch {
hemoCubeBufferDao.updateFieldById(id = bufferId, true)
}
fun getBatteryLevel(): Float? { fun getBatteryLevel(): Float? {
val batteryPct: Float? = batteryStatus?.let { intent -> val batteryPct: Float? = batteryStatus?.let { intent ->
val level: Int = intent.getIntExtra(BatteryManager.EXTRA_LEVEL, -1) val level: Int = intent.getIntExtra(BatteryManager.EXTRA_LEVEL, -1)
@@ -231,7 +260,7 @@ class HemoCubeViewModel @Inject constructor(
fun getBatteryTemperature(): Float? { fun getBatteryTemperature(): Float? {
val batteryTemp: Float? = batteryStatus?.let { intent -> val batteryTemp: Float? = batteryStatus?.let { intent ->
val temperature = intent?.getIntExtra(BatteryManager.EXTRA_TEMPERATURE, 0) ?: 0 val temperature = intent.getIntExtra(BatteryManager.EXTRA_TEMPERATURE, 0)
temperature.toFloat() / 10 temperature.toFloat() / 10
} }
@@ -239,7 +268,8 @@ class HemoCubeViewModel @Inject constructor(
} }
fun getBatteryVoltage(context: Context): Float { fun getBatteryVoltage(context: Context): Float {
val batteryIntent = context.registerReceiver(null, IntentFilter(Intent.ACTION_BATTERY_CHANGED)) val batteryIntent =
context.registerReceiver(null, IntentFilter(Intent.ACTION_BATTERY_CHANGED))
val voltage = batteryIntent?.getIntExtra(BatteryManager.EXTRA_VOLTAGE, 0) ?: 0 val voltage = batteryIntent?.getIntExtra(BatteryManager.EXTRA_VOLTAGE, 0) ?: 0
// milli-volts to volts // milli-volts to volts
@@ -248,7 +278,8 @@ class HemoCubeViewModel @Inject constructor(
fun getBatteryCapacity(context: Context): Int { fun getBatteryCapacity(context: Context): Int {
val batteryManager = context.getSystemService(Context.BATTERY_SERVICE) as BatteryManager val batteryManager = context.getSystemService(Context.BATTERY_SERVICE) as BatteryManager
val currentCapacity = batteryManager.getIntProperty(BatteryManager.BATTERY_PROPERTY_CHARGE_COUNTER) val currentCapacity =
batteryManager.getIntProperty(BatteryManager.BATTERY_PROPERTY_CHARGE_COUNTER)
return currentCapacity return currentCapacity
} }
@@ -256,7 +287,8 @@ class HemoCubeViewModel @Inject constructor(
fun getBatteryMaxCapacity(context: Context): Float { fun getBatteryMaxCapacity(context: Context): Float {
val batteryManager = context.getSystemService(Context.BATTERY_SERVICE) as BatteryManager val batteryManager = context.getSystemService(Context.BATTERY_SERVICE) as BatteryManager
val designCapacity = batteryManager.getIntProperty(BatteryManager.BATTERY_PROPERTY_CAPACITY) val designCapacity = batteryManager.getIntProperty(BatteryManager.BATTERY_PROPERTY_CAPACITY)
val currentCapacity = batteryManager.getIntProperty(BatteryManager.BATTERY_PROPERTY_CHARGE_COUNTER) val currentCapacity =
batteryManager.getIntProperty(BatteryManager.BATTERY_PROPERTY_CHARGE_COUNTER)
// Calculate the estimated maximum battery capacity in mAh // Calculate the estimated maximum battery capacity in mAh
val maxCapacity = currentCapacity.toFloat() / designCapacity.toFloat() * 100 val maxCapacity = currentCapacity.toFloat() / designCapacity.toFloat() * 100