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2 Commits

Author SHA1 Message Date
Pritimay Sarkar
4fef75b937 add new thresholds with additonal method and unit tests 2024-02-06 13:44:00 +05:30
Mariya
42b33c9397 Added code for scan , Issue fixed 2024-02-05 17:23:33 +05:30
6 changed files with 71 additions and 57 deletions

View File

@@ -14,13 +14,13 @@ android {
compileSdk 34 compileSdk 34
namespace 'in.sminnovations.hpostesting' namespace 'in.sminnovations.hpostesting'
// prod - production, preprod - preproduction, quality - qc, dev - development // dev - development, quality - qc, uat - User Acceptance Test, preprod - preproduction, prod - production
defaultConfig { defaultConfig {
applicationId "in.sminnovations.hpostesting.quality" applicationId "in.sminnovations.hpostesting.quality"
minSdk 21 minSdk 21
targetSdk 34 targetSdk 34
versionCode 99 versionCode 101
versionName "2.1.99" versionName "2.1.101"
testInstrumentationRunner "androidx.test.runner.AndroidJUnitRunner" testInstrumentationRunner "androidx.test.runner.AndroidJUnitRunner"
} }

View File

@@ -8,7 +8,7 @@ object Constants {
const val ABHA_APP_PACKAGE = "in.ndhm.phr" const val ABHA_APP_PACKAGE = "in.ndhm.phr"
const val MOLBIO_INTERGATION = false const val MOLBIO_INTEGRATION = false
const val deviceProvisionEmail = "HPOS_provisioner@bigtec.co.in" const val deviceProvisionEmail = "HPOS_provisioner@bigtec.co.in"
const val deviceProvisionPassword = "f2ab0e7f9d69" const val deviceProvisionPassword = "f2ab0e7f9d69"
const val DEVICE_ID_API = "deviceIDAPI" const val DEVICE_ID_API = "deviceIDAPI"

View File

@@ -223,26 +223,40 @@ class KitScanActivity : AppCompatActivity(), IDcsSdkApiDelegate {
notifications_mask or DCSSDKDefs.DCSSDK_EVENT.DCSSDK_EVENT_BARCODE.value notifications_mask or DCSSDKDefs.DCSSDK_EVENT.DCSSDK_EVENT_BARCODE.value
sdkHandler!!.dcssdkSubsribeForEvents(notifications_mask) sdkHandler!!.dcssdkSubsribeForEvents(notifications_mask)
mScannerInfoList.addAll(sdkHandler!!.dcssdkGetAvailableScannersList()) mScannerInfoList.addAll(sdkHandler!!.dcssdkGetAvailableScannersList())
sdkHandler!!.dcssdkEstablishCommunicationSession(mScannerInfoList[0].scannerID) Log.e("scannersize",sdkHandler!!.dcssdkGetAvailableScannersList().size.toString())
if (mScannerInfoList.isNotEmpty()) {
sdkHandler!!.dcssdkEstablishCommunicationSession(mScannerInfoList[0].scannerID)
} else {
Toast.makeText(this,"Error", Toast.LENGTH_LONG).show()
}
} }
fun pullTrigger() { private fun pullTrigger() {
if (!mScannerInfoList[0].isActive) { // Check if the list is not empty before accessing its elements
sdkHandler!!.dcssdkEstablishCommunicationSession(mScannerInfoList[0].scannerID) if (mScannerInfoList.isNotEmpty()) {
// Only proceed if the scanner is not active
if (!mScannerInfoList[0].isActive) {
sdkHandler?.dcssdkEstablishCommunicationSession(mScannerInfoList[0].scannerID)
}
val inXML = "<inArgs><scannerID> 1 </scannerID></inArgs>"
val outXML = StringBuilder()
val result: DCSSDK_RESULT =
sdkHandler!!.dcssdkExecuteCommandOpCodeInXMLForScanner(
DCSSDK_COMMAND_OPCODE.DCSSDK_DEVICE_PULL_TRIGGER, inXML, outXML, mScannerInfoList[0].scannerID // Ensure you're using the correct scanner ID
)
if (result == DCSSDK_RESULT.DCSSDK_RESULT_SUCCESS) {
Log.d("Scanning", "Success")
} else if (result == DCSSDK_RESULT.DCSSDK_RESULT_FAILURE) {
Log.d("Scanning", "Failed")
}
} else {
// Handle the case where the list is empty, perhaps notify the user or log an error
Log.e("ScannerError", "No scanners are connected or available.")
} }
val inXML = "<inArgs><scannerID> 1 </scannerID></inArgs>"
val outXML = StringBuilder()
val result: DCSSDK_RESULT =
sdkHandler!!.dcssdkExecuteCommandOpCodeInXMLForScanner(
DCSSDK_COMMAND_OPCODE.DCSSDK_DEVICE_PULL_TRIGGER, inXML, outXML, 1
)
if (result == DCSSDK_RESULT.DCSSDK_RESULT_SUCCESS) Log.d(
"Scanning",
"Success"
) else if (result == DCSSDK_RESULT.DCSSDK_RESULT_FAILURE) Log.d("Scanning", "Failed")
//new MyAsyncTask(1, DCSSDKDefs.DCSSDK_COMMAND_OPCODE.DCSSDK_DEVICE_PULL_TRIGGER,null).execute(inXML);
} }
//this function is called if barcode is detected. //this function is called if barcode is detected.
override fun dcssdkEventBarcode(barcodeData: ByteArray?, barcodeType: Int, fromScannerID: Int) { override fun dcssdkEventBarcode(barcodeData: ByteArray?, barcodeType: Int, fromScannerID: Int) {
val result = String(barcodeData!!) val result = String(barcodeData!!)

View File

@@ -153,7 +153,7 @@ class HemoCubeFragment : Fragment() {
when (it) { when (it) {
is Result.Success -> { is Result.Success -> {
uploadedToMolbio = true uploadedToMolbio = true
if (Constants.MOLBIO_INTERGATION) { if (Constants.MOLBIO_INTEGRATION) {
it.data.data?.get(0)?.rawData?.let { it1 -> it.data.data?.get(0)?.rawData?.let { it1 ->
hemoCubeViewModel.updateMolbioFlag( hemoCubeViewModel.updateMolbioFlag(
it1._id it1._id
@@ -805,8 +805,8 @@ class HemoCubeFragment : Fragment() {
calculatedPredictedDenovixRatio = fittedAbs3.div(fittedAbs1) calculatedPredictedDenovixRatio = fittedAbs3.div(fittedAbs1)
val slope = (led1Average - led2Average) / (435 - 415) val slope = (led4Average - led1Average) / (431-411)
val calculatedSlopeRatio = abs(led3Average / slope) val calculatedSlopeRatio = abs(led2Average / slope)
val slopeClass = slopeRatioClassification(calculatedSlopeRatio) val slopeClass = slopeRatioClassification(calculatedSlopeRatio)
if (fittedAbs1 <= fittedAbs2) { if (fittedAbs1 <= fittedAbs2) {
@@ -874,8 +874,8 @@ class HemoCubeFragment : Fragment() {
this.prdClassification = absorbanceBasedClassification(predictedDenovixRatio) this.prdClassification = absorbanceBasedClassification(predictedDenovixRatio)
this.deviceRatioClass = deviceRatioClassification(deviceRatio) this.deviceRatioClass = deviceRatioClassification(deviceRatio)
this.slopeRatioClass = slopeClass this.slopeRatioClass = slopeClass
this.classificationResult = deviceRatioClass //findResult(calculatedRatio) this.classificationResult = findResultWithAdditionalMethods(deviceRatio, deviceRatioClass, slopeRatio)
hemoCubeViewModel.messages.postValue("${this.deviceRatioClass} ${if (led4Average < 0.17) " - Low Hb" else ""}\n") hemoCubeViewModel.messages.postValue("${this.classificationResult} ")
if (DataHolder.hemoCubeTestData?.testType == "HB") if (DataHolder.hemoCubeTestData?.testType == "HB")
hemoCubeViewModel.messages.postValue("Hb: $calculatedHb4") hemoCubeViewModel.messages.postValue("Hb: $calculatedHb4")
this.errorMessages = testState.allErrorMessages this.errorMessages = testState.allErrorMessages
@@ -909,50 +909,36 @@ class HemoCubeFragment : Fragment() {
} }
} }
fun findResult(calculatedRatio: Double?): String { fun findResultWithAdditionalMethods(deviceRatio: Double?, deviceRatioClass: String?, slopeRatio: Double?): String {
try { try {
hemoCubeViewModel.messages.postValue("result classification") // hemoCubeViewModel.messages.postValue("post classification checks")
if (calculatedRatio != null) { if (deviceRatio != null) {
if (calculatedRatio < 0.05) if (slopeRatio != null) {
return getString(R.string.error_repeat_test_higher_volume) if (deviceRatioClass == "Normal" && slopeRatio > 60.0)
if (calculatedRatio in 0.05..0.155) { return "Negative Borderline, Repeat Test"
return getString(R.string.normal)
} }
if (calculatedRatio in 0.155..0.175)
return getString(R.string.negative_borderline)
if (calculatedRatio in 0.175..0.22)
return getString(R.string.sickle_cell_trait)
if (calculatedRatio in 0.22..0.25)
return getString(R.string.positive_for_sickle_cell)
if (calculatedRatio in 0.25..0.35)
return getString(R.string.sickle_cell_disease)
if (calculatedRatio > 0.35)
return getString(R.string.error_repeat_test_lower_volume)
} else {
return getString(R.string.invalid)
} }
} catch (e: Exception) { } catch (e: Exception) {
showToast(R.string.error_classification) handleException(e)
Firebase.crashlytics.recordException(e) return "Error"
return getString(R.string.error)
} }
return getString(R.string.invalid) return deviceRatioClass.toString()
} }
fun deviceRatioClassification(ratio: Double?): String { fun deviceRatioClassification(ratio: Double?): String {
try { try {
if (ratio != null) { if (ratio != null) {
if (ratio in 0.1..0.29) { if (ratio in 0.001..0.23) {
// setSubtitleTextColor(R.color.green_2) // setSubtitleTextColor(R.color.green_2)
return "Normal" return "Normal"
} }
if (ratio in 0.29..0.32) if (ratio in 0.23..0.24)
return "Negative Borderline, Repeat Test" return "Negative Borderline, Repeat Test"
if (ratio in 0.32..0.35) if (ratio in 0.24..0.29)
return "Sickle Cell Trait" return "Sickle Cell Trait"
if (ratio in 0.35..0.38) if (ratio in 0.29..0.32)
return "Positive for Sickle Cell. HPLC for Confirmation" return "Positive for Sickle Cell. HPLC for Confirmation"
if (ratio in 0.38..0.5) if (ratio in 0.32..Double.POSITIVE_INFINITY)
return "Sickle Cell Disease" return "Sickle Cell Disease"
} else { } else {
return "Invalid" return "Invalid"

View File

@@ -156,7 +156,7 @@ class TrueHemeFragment : Fragment() {
when (it) { when (it) {
is Result.Success -> { is Result.Success -> {
uploadedToMolbio = true uploadedToMolbio = true
if (Constants.MOLBIO_INTERGATION) { if (Constants.MOLBIO_INTEGRATION) {
it.data.data?.get(0)?.rawData?.let { it1 -> it.data.data?.get(0)?.rawData?.let { it1 ->
hemoCubeViewModel.updateMolbioFlag( hemoCubeViewModel.updateMolbioFlag(
it1._id it1._id

View File

@@ -318,28 +318,28 @@ class HemoCubeFragmentTest {
@Test @Test
fun testDeviceRatioClassificationNormal() { fun testDeviceRatioClassificationNormal() {
val ratio = 0.25 val ratio = 0.22
val result = hemoCubeFragment.deviceRatioClassification(ratio) val result = hemoCubeFragment.deviceRatioClassification(ratio)
assertEquals("Normal", result) assertEquals("Normal", result)
} }
@Test @Test
fun testDeviceRatioClassificationNegativeBorderline() { fun testDeviceRatioClassificationNegativeBorderline() {
val ratio = 0.31 val ratio = 0.235
val result = hemoCubeFragment.deviceRatioClassification(ratio) val result = hemoCubeFragment.deviceRatioClassification(ratio)
assertEquals("Negative Borderline, Repeat Test", result) assertEquals("Negative Borderline, Repeat Test", result)
} }
@Test @Test
fun testDeviceRatioClassificationSickleCellTrait() { fun testDeviceRatioClassificationSickleCellTrait() {
val ratio = 0.34 val ratio = 0.25
val result = hemoCubeFragment.deviceRatioClassification(ratio) val result = hemoCubeFragment.deviceRatioClassification(ratio)
assertEquals("Sickle Cell Trait", result) assertEquals("Sickle Cell Trait", result)
} }
@Test @Test
fun testDeviceRatioClassificationPositiveForSickleCell() { fun testDeviceRatioClassificationPositiveForSickleCell() {
val ratio = 0.37 val ratio = 0.31
val result = hemoCubeFragment.deviceRatioClassification(ratio) val result = hemoCubeFragment.deviceRatioClassification(ratio)
assertEquals("Positive for Sickle Cell. HPLC for Confirmation", result) assertEquals("Positive for Sickle Cell. HPLC for Confirmation", result)
} }
@@ -357,4 +357,18 @@ class HemoCubeFragmentTest {
val result = hemoCubeFragment.deviceRatioClassification(ratio) val result = hemoCubeFragment.deviceRatioClassification(ratio)
assertEquals("Invalid", result) assertEquals("Invalid", result)
} }
@Test
fun findResultWithAdditionalMethods_ValidInput_ReturnsNegativeBorderlineRepeatTest() {
// `when`(hemoCubeFragment.findResultWithAdditionalMethods(0.5, "Normal", 70.0)).thenReturn("Negative Borderline, Repeat Test")
val result = hemoCubeFragment.findResultWithAdditionalMethods(0.5, "Normal", 70.0)
assertEquals("Negative Borderline, Repeat Test", result)
}
@Test
fun findResultWithAdditionalMethods_ValidInput_ReturnsDeviceRatioClassToString() {
// `when`(hemoCubeFragment.findResultWithAdditionalMethods(0.5, "Abnormal", 70.0)).thenReturn("Invalid")
val result = hemoCubeFragment.findResultWithAdditionalMethods(0.5, "Abnormal", 70.0)
assertEquals("Abnormal", result)
}
} }