Compare commits
19 Commits
nats_certi
...
2.1.119
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4fef75b937 |
@@ -14,13 +14,13 @@ android {
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compileSdk 34
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compileSdk 34
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namespace 'in.sminnovations.hpostesting'
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namespace 'in.sminnovations.hpostesting'
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// prod - production, preprod - preproduction, quality - qc, dev - development
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// dev - development, quality - qc, uat - User Acceptance Test, preprod - preproduction, prod - production
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defaultConfig {
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defaultConfig {
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applicationId "in.sminnovations.hpostesting.quality"
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applicationId "in.sminnovations.hpostesting.quality"
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minSdk 21
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minSdk 21
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targetSdk 34
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targetSdk 34
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versionCode 99
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versionCode 106
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versionName "2.1.99"
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versionName "2.1.106"
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testInstrumentationRunner "androidx.test.runner.AndroidJUnitRunner"
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testInstrumentationRunner "androidx.test.runner.AndroidJUnitRunner"
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}
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}
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@@ -95,6 +95,7 @@
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android:exported="false"
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android:exported="false"
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android:label="@string/title_activity_dashboard"
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android:label="@string/title_activity_dashboard"
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android:theme="@style/Theme.HPOS.NoActionBar"
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android:theme="@style/Theme.HPOS.NoActionBar"
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android:screenOrientation="portrait"
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tools:ignore="AppLinkUrlError,MissingClass">
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tools:ignore="AppLinkUrlError,MissingClass">
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<intent-filter>
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<intent-filter>
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@@ -119,9 +120,12 @@
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android:theme="@style/AppTheme.NoActionBar">
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android:theme="@style/AppTheme.NoActionBar">
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<intent-filter>
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<intent-filter>
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<action android:name="android.intent.action.MAIN" />
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<action android:name="android.intent.action.MAIN" />
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<category android:name="android.intent.category.HOME" />
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<category android:name="android.intent.category.DEFAULT" />
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<category android:name="android.intent.category.LAUNCHER" />
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<category android:name="android.intent.category.LAUNCHER" />
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<category android:name="android.intent.category.HOME" />
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<category android:name="android.intent.category.DEFAULT" />
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<category android:name="android.intent.category.MONKEY"/>
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<category android:name="android.intent.category.LAUNCHER_APP" />
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</intent-filter>
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</intent-filter>
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</activity>
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</activity>
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<activity
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<activity
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@@ -161,7 +165,7 @@
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<provider
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<provider
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android:name="androidx.core.content.FileProvider"
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android:name="androidx.core.content.FileProvider"
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android:authorities="com.example.hpostesting.fileprovider"
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android:authorities="${applicationId}.fileprovider"
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android:exported="false"
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android:exported="false"
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android:grantUriPermissions="true">
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android:grantUriPermissions="true">
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<meta-data
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<meta-data
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@@ -8,7 +8,7 @@ object Constants {
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const val ABHA_APP_PACKAGE = "in.ndhm.phr"
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const val ABHA_APP_PACKAGE = "in.ndhm.phr"
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const val MOLBIO_INTERGATION = false
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const val MOLBIO_INTEGRATION = false
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const val deviceProvisionEmail = "HPOS_provisioner@bigtec.co.in"
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const val deviceProvisionEmail = "HPOS_provisioner@bigtec.co.in"
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const val deviceProvisionPassword = "f2ab0e7f9d69"
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const val deviceProvisionPassword = "f2ab0e7f9d69"
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const val DEVICE_ID_API = "deviceIDAPI"
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const val DEVICE_ID_API = "deviceIDAPI"
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@@ -5,5 +5,8 @@ data class DiagnosticsData (
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var appVersion: String? = "",
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var appVersion: String? = "",
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var deviceType: String = "HEMOCUBE",
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var deviceType: String = "HEMOCUBE",
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var deviceData: String = "",
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var deviceData: String = "",
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var devicePassword: String = "",
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var deviceNatsToken: String = "",
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var accessToken: String = "",
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var runTime: String = ""
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var runTime: String = ""
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)
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)
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@@ -11,6 +11,7 @@ import io.nats.client.Message
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import io.nats.client.NKey
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import io.nats.client.NKey
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import io.nats.client.Nats
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import io.nats.client.Nats
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import io.nats.client.Options
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import io.nats.client.Options
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import io.nats.client.support.SSLUtils
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import java.io.BufferedInputStream
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import java.io.BufferedInputStream
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import java.io.File
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import java.io.File
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import java.io.FileInputStream
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import java.io.FileInputStream
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@@ -85,7 +86,7 @@ class NatsManager(datacollector: DashboardActivity) {
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val options = Options.Builder()
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val options = Options.Builder()
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.server("nats://nanodgx.in:4222")
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.server("nats://nanodgx.in:4222")
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.sslContext(createSSLContext())
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.sslContext(SSLUtils.createOpenTLSContext())
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.authHandler(object : AuthHandler {
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.authHandler(object : AuthHandler {
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override fun getID(): CharArray? {
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override fun getID(): CharArray? {
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return try {
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return try {
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@@ -145,7 +146,7 @@ class NatsManager(datacollector: DashboardActivity) {
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d?.subscribe("device.hpos.HCV-000-3001.update") { msg ->
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d?.subscribe("device.hpos.HCV-000-3001.update") { msg ->
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val response = String(msg.data, StandardCharsets.UTF_8)
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val response = String(msg.data, StandardCharsets.UTF_8)
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datacollector. setResponse(response)
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datacollector.setResponse(response)
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println("Message received (up to 100 times): $response")
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println("Message received (up to 100 times): $response")
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}
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}
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@@ -12,6 +12,7 @@ import android.view.ViewGroup
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import android.widget.AdapterView
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import android.widget.AdapterView
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import android.widget.ArrayAdapter
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import android.widget.ArrayAdapter
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import android.widget.Spinner
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import android.widget.Spinner
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import android.widget.Toast
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import androidx.fragment.app.Fragment
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import androidx.fragment.app.Fragment
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import com.example.hpostesting.data.DataHolder
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import com.example.hpostesting.data.DataHolder
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import com.example.hpostesting.data.constant.Constants
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import com.example.hpostesting.data.constant.Constants
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@@ -30,6 +31,9 @@ class AssuranceControlsFragment: Fragment() {
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binding = FragmentAssuranceControlsBinding.inflate(inflater, container, false)
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binding = FragmentAssuranceControlsBinding.inflate(inflater, container, false)
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sharedPreferences =
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sharedPreferences =
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requireContext().getSharedPreferences("HEMOCUBE", Context.MODE_PRIVATE)
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requireContext().getSharedPreferences("HEMOCUBE", Context.MODE_PRIVATE)
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DataHolder.hemoCubeTestData!!.solution = ""
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DataHolder.hemoCubeTestData!!.volume = ""
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return binding.root
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return binding.root
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}
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}
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@@ -42,7 +46,7 @@ class AssuranceControlsFragment: Fragment() {
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// binding.btnSubmit.visibility = View.GONE
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// binding.btnSubmit.visibility = View.GONE
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val solutionSpinner: Spinner = binding.spinnerSolutions
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val solutionSpinner: Spinner = binding.spinnerSolutions
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val solutionOptions = arrayOf("Select solution", "Tartrazine", "AR")
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val solutionOptions = arrayOf("Select solution", "Tartrazine", "Acid Red")
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val solutionAdapter = ArrayAdapter(requireContext(), R.layout.simple_spinner_item, solutionOptions)
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val solutionAdapter = ArrayAdapter(requireContext(), R.layout.simple_spinner_item, solutionOptions)
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solutionAdapter.setDropDownViewResource(android.R.layout.simple_spinner_dropdown_item)
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solutionAdapter.setDropDownViewResource(android.R.layout.simple_spinner_dropdown_item)
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solutionSpinner.adapter = solutionAdapter
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solutionSpinner.adapter = solutionAdapter
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@@ -121,6 +125,13 @@ class AssuranceControlsFragment: Fragment() {
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volumeSpinner.setSelection(volumePosition)
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volumeSpinner.setSelection(volumePosition)
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binding.btnSubmit.setOnClickListener {
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binding.btnSubmit.setOnClickListener {
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val selectedSolution = DataHolder.hemoCubeTestData!!.solution
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val selectedVolume = DataHolder.hemoCubeTestData!!.volume
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if (selectedSolution == "Select solution" || selectedVolume == "Select volume") {
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Toast.makeText(requireContext(), "Please select both solution and volume", Toast.LENGTH_SHORT).show()
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return@setOnClickListener
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}
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DataHolder.hemoCubeTestData!!.quickCapture = true
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DataHolder.hemoCubeTestData!!.quickCapture = true
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val currentUnixTime = if (Build.VERSION.SDK_INT >= Build.VERSION_CODES.O) {
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val currentUnixTime = if (Build.VERSION.SDK_INT >= Build.VERSION_CODES.O) {
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Instant.now().epochSecond
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Instant.now().epochSecond
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@@ -105,8 +105,6 @@ class AutoDacFragment: Fragment() {
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HemoCubeCommands.AUTO_DAC_COMMAND,
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HemoCubeCommands.AUTO_DAC_COMMAND,
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object : UsbServiceListener {
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object : UsbServiceListener {
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override fun onUsbRead(data: ByteArray?) {
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override fun onUsbRead(data: ByteArray?) {
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}
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}
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override fun onUsbError(e: Exception?) {
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override fun onUsbError(e: Exception?) {
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autoDacViewModel.progressBar.postValue(false)
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autoDacViewModel.progressBar.postValue(false)
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@@ -148,6 +146,9 @@ class AutoDacFragment: Fragment() {
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autoDacViewModel.addAutoDacDataToDb(
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autoDacViewModel.addAutoDacDataToDb(
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DiagnosticsData(
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DiagnosticsData(
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deviceId = sharedPreferences.getString(Constants.DEVICE_ID, "").toString(),
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deviceId = sharedPreferences.getString(Constants.DEVICE_ID, "").toString(),
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devicePassword = sharedPreferences.getString(Constants.DEVICE_PASSWORD_API, "").toString(),
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deviceNatsToken = sharedPreferences.getString(Constants.NATS_TOKEN, "").toString(),
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accessToken = sharedPreferences.getString(Constants.ACCESS_TOKEN, "").toString(),
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deviceData = resultData,
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deviceData = resultData,
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runTime = SimpleDateFormat(
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runTime = SimpleDateFormat(
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"yyyy-MM-dd HH:mm:ss", Locale.getDefault()
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"yyyy-MM-dd HH:mm:ss", Locale.getDefault()
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@@ -169,7 +170,6 @@ class AutoDacFragment: Fragment() {
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}
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}
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}
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}
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fun parseData(inputData: List<String>): List<Pair<String, String>> {
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fun parseData(inputData: List<String>): List<Pair<String, String>> {
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val pattern = Regex("([A-Z]+)\\s(\\d+)")
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val pattern = Regex("([A-Z]+)\\s(\\d+)")
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val parsedData = mutableListOf<Pair<String, String>>()
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val parsedData = mutableListOf<Pair<String, String>>()
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@@ -156,9 +156,10 @@ class DashboardActivity : AppCompatActivity(), IDataCollector {
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val file = File(getExternalFilesDir("Updates"), "update.apk")
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val file = File(getExternalFilesDir("Updates"), "update.apk")
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file.setReadable(true, false) // Ensure the file is readable
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file.setReadable(true, false) // Ensure the file is readable
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val pInfo = baseContext.packageManager.getPackageInfo(baseContext.packageName, 0)
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val uri: Uri = FileProvider.getUriForFile(
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val uri: Uri = FileProvider.getUriForFile(
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this,
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this,
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"com.example.hpostesting.fileprovider",
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"${pInfo}.fileprovider",
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file
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file
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)
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)
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@@ -1,6 +1,7 @@
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package com.example.hpostesting.presentation.dashboard
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package com.example.hpostesting.presentation.dashboard
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import android.annotation.SuppressLint
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import android.annotation.SuppressLint
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import android.content.ComponentName
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import android.content.Context
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import android.content.Context
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import android.content.Intent
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import android.content.Intent
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import android.content.SharedPreferences
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import android.content.SharedPreferences
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@@ -14,12 +15,13 @@ import com.example.hpostesting.data.constant.Constants
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import com.example.hpostesting.presentation.autodac.AutoDacActivity
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import com.example.hpostesting.presentation.autodac.AutoDacActivity
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import com.example.hpostesting.presentation.buffercheck.HemocubeBufferCheckActivity
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import com.example.hpostesting.presentation.buffercheck.HemocubeBufferCheckActivity
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import com.example.hpostesting.presentation.calibration.CalibrationActivity
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import com.example.hpostesting.presentation.calibration.CalibrationActivity
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import com.example.hpostesting.presentation.deviceprovision.DeviceProvisionActivity
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import com.example.hpostesting.presentation.deviceinfo.DeviceActivity
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import com.example.hpostesting.presentation.deviceinfo.DeviceActivity
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import com.example.hpostesting.presentation.deviceprovision.DeviceProvisionActivity
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import com.example.hpostesting.presentation.diagnostics.DiagnosticsActivity
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import com.example.hpostesting.presentation.diagnostics.DiagnosticsActivity
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import com.example.hpostesting.presentation.hemocube.HemoCubeViewModel
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import com.example.hpostesting.presentation.hemocube.HemoCubeViewModel
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import `in`.sminnovations.hpostesting.databinding.FragmentGalleryBinding
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import `in`.sminnovations.hpostesting.databinding.FragmentGalleryBinding
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|
|
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class GalleryFragment : Fragment() {
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class GalleryFragment : Fragment() {
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|
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private var _binding: FragmentGalleryBinding? = null
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private var _binding: FragmentGalleryBinding? = null
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@@ -82,6 +84,19 @@ class GalleryFragment : Fragment() {
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startActivity(Intent(requireContext(), DeviceActivity::class.java))
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startActivity(Intent(requireContext(), DeviceActivity::class.java))
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}
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}
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|
|
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binding.btnFirefox.setOnClickListener {
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val intent = Intent(Intent.ACTION_VIEW)
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intent.component = ComponentName("org.mozilla.firefox", "org.mozilla.gecko.BrowserApp")
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startActivity(intent)
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}
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|
|
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binding.btnFiles.setOnClickListener {
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val intent = Intent(Intent.ACTION_GET_CONTENT)
|
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intent.type = "file/*"
|
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startActivity(intent)
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|
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|
}
|
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|
|
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userid = sharedPreferences.getString(Constants.USER_ID, "").toString()
|
userid = sharedPreferences.getString(Constants.USER_ID, "").toString()
|
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binding.tvSubtitle4.text = "Login ID : ${userid}"
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binding.tvSubtitle4.text = "Login ID : ${userid}"
|
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|
|
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|
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@@ -120,7 +120,6 @@ class DeviceProvisionFragment : Fragment() {
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}
|
}
|
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}
|
}
|
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|
|
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|
|
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private fun getDeviceId() {
|
private fun getDeviceId() {
|
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(activity as DeviceProvisionActivity).mService.sendAndListenToHemoCube(
|
(activity as DeviceProvisionActivity).mService.sendAndListenToHemoCube(
|
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HemoCubeCommands.DEVICE_CONFIGURATION_COMMAND,
|
HemoCubeCommands.DEVICE_CONFIGURATION_COMMAND,
|
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@@ -152,14 +151,19 @@ class DeviceProvisionFragment : Fragment() {
|
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}
|
}
|
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}
|
}
|
||||||
|
|
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|
fun extractV2HardwareId(input: String): String? {
|
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|
val pattern = Regex("SNS\\s*(.*?)\\s*SNE")
|
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|
val matchResult: MatchResult? = pattern.find(input)
|
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|
|
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|
return matchResult?.groups?.get(1)?.value
|
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|
}
|
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|
|
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private fun handleUsbData() {
|
private fun handleUsbData() {
|
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when {
|
when {
|
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resultData.contains("SNE") -> {
|
resultData.contains("SNE") -> {
|
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val pattern = Regex("HPP1-\\d{4}")
|
val hardwareId = extractV2HardwareId(resultData)
|
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val matchResult = pattern.find(resultData)
|
|
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val hardwareId = matchResult?.value
|
|
||||||
|
|
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if (hardwareId.toString().length == 9) {
|
if (!hardwareId.isNullOrBlank()) {
|
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with(sharedPreferences.edit()) {
|
with(sharedPreferences.edit()) {
|
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putString(Constants.DEVICE_ID, hardwareId)
|
putString(Constants.DEVICE_ID, hardwareId)
|
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apply()
|
apply()
|
||||||
|
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@@ -148,6 +148,9 @@ class DiagnosticsFragment : Fragment() {
|
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if (resultData.contains("END") || fullReadOutput.contains("END")) {
|
if (resultData.contains("END") || fullReadOutput.contains("END")) {
|
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diagnosticsViewModel.addDiagnosticsDataToDb(DiagnosticsData(
|
diagnosticsViewModel.addDiagnosticsDataToDb(DiagnosticsData(
|
||||||
deviceId = sharedPreferences.getString(Constants.DEVICE_ID, "").toString(),
|
deviceId = sharedPreferences.getString(Constants.DEVICE_ID, "").toString(),
|
||||||
|
devicePassword = sharedPreferences.getString(Constants.DEVICE_PASSWORD_API, "").toString(),
|
||||||
|
deviceNatsToken = sharedPreferences.getString(Constants.NATS_TOKEN, "").toString(),
|
||||||
|
accessToken = sharedPreferences.getString(Constants.ACCESS_TOKEN, "").toString(),
|
||||||
deviceData = resultData,
|
deviceData = resultData,
|
||||||
runTime = SimpleDateFormat(
|
runTime = SimpleDateFormat(
|
||||||
"yyyy-MM-dd HH:mm:ss", Locale.getDefault()
|
"yyyy-MM-dd HH:mm:ss", Locale.getDefault()
|
||||||
|
|||||||
@@ -153,7 +153,7 @@ class HemoCubeFragment : Fragment() {
|
|||||||
when (it) {
|
when (it) {
|
||||||
is Result.Success -> {
|
is Result.Success -> {
|
||||||
uploadedToMolbio = true
|
uploadedToMolbio = true
|
||||||
if (Constants.MOLBIO_INTERGATION) {
|
if (Constants.MOLBIO_INTEGRATION) {
|
||||||
it.data.data?.get(0)?.rawData?.let { it1 ->
|
it.data.data?.get(0)?.rawData?.let { it1 ->
|
||||||
hemoCubeViewModel.updateMolbioFlag(
|
hemoCubeViewModel.updateMolbioFlag(
|
||||||
it1._id
|
it1._id
|
||||||
@@ -643,10 +643,10 @@ class HemoCubeFragment : Fragment() {
|
|||||||
|
|
||||||
if (!Constants.DEVICE_CONFIGURATION.containsKey(deviceHardwareId)) {
|
if (!Constants.DEVICE_CONFIGURATION.containsKey(deviceHardwareId)) {
|
||||||
assignDefaultDevice(resultData)
|
assignDefaultDevice(resultData)
|
||||||
testState.allErrorMessages += "Calibration configuration for this device id is not found\n"
|
// testState.allErrorMessages += "Calibration configuration for this device id is not found\n"
|
||||||
}
|
}
|
||||||
if (!Constants.BUFFER_INTENSITY_THRESHOLDS.containsKey(deviceHardwareId)) {
|
if (!Constants.BUFFER_INTENSITY_THRESHOLDS.containsKey(deviceHardwareId)) {
|
||||||
testState.allErrorMessages += "ADC thresholds for this device id are not found\n"
|
// testState.allErrorMessages += "ADC thresholds for this device id are not found\n"
|
||||||
}
|
}
|
||||||
}
|
}
|
||||||
|
|
||||||
@@ -743,9 +743,9 @@ class HemoCubeFragment : Fragment() {
|
|||||||
)?.get(0)!!
|
)?.get(0)!!
|
||||||
) {
|
) {
|
||||||
// validationError = true
|
// validationError = true
|
||||||
testState.allErrorMessages += "Error: Invalid Test. Improper buffer reading (low)"
|
// testState.allErrorMessages += "Error: Invalid Test. Improper buffer reading (low)"
|
||||||
activity?.runOnUiThread {
|
activity?.runOnUiThread {
|
||||||
binding.errorMessage.text = getString(R.string.error_improper_buffer_low)
|
// binding.errorMessage.text = getString(R.string.error_improper_buffer_low)
|
||||||
// binding.errorMessage.visibility = View.VISIBLE
|
// binding.errorMessage.visibility = View.VISIBLE
|
||||||
}
|
}
|
||||||
}
|
}
|
||||||
@@ -763,11 +763,11 @@ class HemoCubeFragment : Fragment() {
|
|||||||
)?.get(1)!!
|
)?.get(1)!!
|
||||||
) {
|
) {
|
||||||
// validationError = true
|
// validationError = true
|
||||||
testState.allErrorMessages += "Error: Invalid Test. Improper buffer reading (high)" + "\n"
|
// testState.allErrorMessages += "Error: Invalid Test. Improper buffer reading (high)" + "\n"
|
||||||
activity?.runOnUiThread {
|
activity?.runOnUiThread {
|
||||||
binding.errorMessage.text =
|
// binding.errorMessage.text =
|
||||||
getString(R.string.error_improper_buffer_high)
|
getString(R.string.error_improper_buffer_high)
|
||||||
binding.errorMessage.visibility = View.VISIBLE
|
// binding.errorMessage.visibility = View.VISIBLE
|
||||||
}
|
}
|
||||||
}
|
}
|
||||||
|
|
||||||
@@ -805,15 +805,15 @@ class HemoCubeFragment : Fragment() {
|
|||||||
|
|
||||||
calculatedPredictedDenovixRatio = fittedAbs3.div(fittedAbs1)
|
calculatedPredictedDenovixRatio = fittedAbs3.div(fittedAbs1)
|
||||||
|
|
||||||
val slope = (led1Average - led2Average) / (435 - 415)
|
val slope = (led4Average - led1Average) / (431-411)
|
||||||
val calculatedSlopeRatio = abs(led3Average / slope)
|
val calculatedSlopeRatio = abs(led2Average / slope)
|
||||||
val slopeClass = slopeRatioClassification(calculatedSlopeRatio)
|
val slopeClass = slopeRatioClassification(calculatedSlopeRatio)
|
||||||
|
|
||||||
if (fittedAbs1 <= fittedAbs2) {
|
if (fittedAbs1 <= fittedAbs2) {
|
||||||
// validationError = true
|
// validationError = true
|
||||||
testState.allErrorMessages += "Error: Invalid Test. Problem with de-oxygenation" + "\n"
|
// testState.allErrorMessages += "Error: Invalid Test. Problem with de-oxygenation" + "\n"
|
||||||
activity?.runOnUiThread {
|
activity?.runOnUiThread {
|
||||||
binding.errorMessage.text = getString(R.string.error_invalid_test)
|
// binding.errorMessage.text = getString(R.string.error_invalid_test)
|
||||||
// binding.errorMessage.visibility = View.VISIBLE
|
// binding.errorMessage.visibility = View.VISIBLE
|
||||||
}
|
}
|
||||||
}
|
}
|
||||||
@@ -837,9 +837,9 @@ class HemoCubeFragment : Fragment() {
|
|||||||
|
|
||||||
if (fittedAbs3 < 0.1) {
|
if (fittedAbs3 < 0.1) {
|
||||||
// validationError = true
|
// validationError = true
|
||||||
testState.allErrorMessages += "Error: Low Hb. Repeat test" + "\n"
|
// testState.allErrorMessages += "Error: Low Hb. Repeat test" + "\n"
|
||||||
activity?.runOnUiThread {
|
activity?.runOnUiThread {
|
||||||
binding.errorMessage.text = "Error: Low Hb. Repeat test"
|
// binding.errorMessage.text = "Error: Low Hb. Repeat test"
|
||||||
// binding.errorMessage.visibility = View.VISIBLE
|
// binding.errorMessage.visibility = View.VISIBLE
|
||||||
}
|
}
|
||||||
}
|
}
|
||||||
@@ -874,8 +874,8 @@ class HemoCubeFragment : Fragment() {
|
|||||||
this.prdClassification = absorbanceBasedClassification(predictedDenovixRatio)
|
this.prdClassification = absorbanceBasedClassification(predictedDenovixRatio)
|
||||||
this.deviceRatioClass = deviceRatioClassification(deviceRatio)
|
this.deviceRatioClass = deviceRatioClassification(deviceRatio)
|
||||||
this.slopeRatioClass = slopeClass
|
this.slopeRatioClass = slopeClass
|
||||||
this.classificationResult = deviceRatioClass //findResult(calculatedRatio)
|
this.classificationResult = deviceRatioClass
|
||||||
hemoCubeViewModel.messages.postValue("${this.deviceRatioClass} ${if (led4Average < 0.17) " - Low Hb" else ""}\n")
|
hemoCubeViewModel.messages.postValue("${this.classificationResult} \n Device Ratio: ${"%.3f".format(this.deviceRatio)}")
|
||||||
if (DataHolder.hemoCubeTestData?.testType == "HB")
|
if (DataHolder.hemoCubeTestData?.testType == "HB")
|
||||||
hemoCubeViewModel.messages.postValue("Hb: $calculatedHb4")
|
hemoCubeViewModel.messages.postValue("Hb: $calculatedHb4")
|
||||||
this.errorMessages = testState.allErrorMessages
|
this.errorMessages = testState.allErrorMessages
|
||||||
@@ -909,50 +909,36 @@ class HemoCubeFragment : Fragment() {
|
|||||||
}
|
}
|
||||||
}
|
}
|
||||||
|
|
||||||
fun findResult(calculatedRatio: Double?): String {
|
fun findResultWithAdditionalMethods(deviceRatio: Double?, deviceRatioClass: String?, slopeRatio: Double?): String {
|
||||||
try {
|
try {
|
||||||
hemoCubeViewModel.messages.postValue("result classification")
|
// hemoCubeViewModel.messages.postValue("post classification checks")
|
||||||
if (calculatedRatio != null) {
|
if (deviceRatio != null) {
|
||||||
if (calculatedRatio < 0.05)
|
if (slopeRatio != null) {
|
||||||
return getString(R.string.error_repeat_test_higher_volume)
|
if (deviceRatioClass == "Normal" && slopeRatio > 45.0)
|
||||||
if (calculatedRatio in 0.05..0.155) {
|
return "Negative Borderline, Repeat Test"
|
||||||
return getString(R.string.normal)
|
|
||||||
}
|
}
|
||||||
if (calculatedRatio in 0.155..0.175)
|
|
||||||
return getString(R.string.negative_borderline)
|
|
||||||
if (calculatedRatio in 0.175..0.22)
|
|
||||||
return getString(R.string.sickle_cell_trait)
|
|
||||||
if (calculatedRatio in 0.22..0.25)
|
|
||||||
return getString(R.string.positive_for_sickle_cell)
|
|
||||||
if (calculatedRatio in 0.25..0.35)
|
|
||||||
return getString(R.string.sickle_cell_disease)
|
|
||||||
if (calculatedRatio > 0.35)
|
|
||||||
return getString(R.string.error_repeat_test_lower_volume)
|
|
||||||
} else {
|
|
||||||
return getString(R.string.invalid)
|
|
||||||
}
|
}
|
||||||
} catch (e: Exception) {
|
} catch (e: Exception) {
|
||||||
showToast(R.string.error_classification)
|
handleException(e)
|
||||||
Firebase.crashlytics.recordException(e)
|
return "Error"
|
||||||
return getString(R.string.error)
|
|
||||||
}
|
}
|
||||||
return getString(R.string.invalid)
|
return deviceRatioClass.toString()
|
||||||
}
|
}
|
||||||
|
|
||||||
fun deviceRatioClassification(ratio: Double?): String {
|
fun deviceRatioClassification(ratio: Double?): String {
|
||||||
try {
|
try {
|
||||||
if (ratio != null) {
|
if (ratio != null) {
|
||||||
if (ratio in 0.1..0.29) {
|
if (ratio in 0.016..0.22) {
|
||||||
// setSubtitleTextColor(R.color.green_2)
|
// setSubtitleTextColor(R.color.green_2)
|
||||||
return "Normal"
|
return "Normal"
|
||||||
}
|
}
|
||||||
if (ratio in 0.29..0.32)
|
if (ratio in 0.22..0.24)
|
||||||
return "Negative Borderline, Repeat Test"
|
return "Negative Borderline"
|
||||||
if (ratio in 0.32..0.35)
|
if (ratio in 0.24..0.32)
|
||||||
return "Sickle Cell Trait"
|
return "Sickle Cell Trait"
|
||||||
if (ratio in 0.35..0.38)
|
if (ratio in 0.32..0.37)
|
||||||
return "Positive for Sickle Cell. HPLC for Confirmation"
|
return "Positive for Sickle Cell. HPLC for Confirmation"
|
||||||
if (ratio in 0.38..0.5)
|
if (ratio in 0.37..0.56)
|
||||||
return "Sickle Cell Disease"
|
return "Sickle Cell Disease"
|
||||||
} else {
|
} else {
|
||||||
return "Invalid"
|
return "Invalid"
|
||||||
|
|||||||
@@ -11,12 +11,14 @@ import android.content.ServiceConnection
|
|||||||
import android.hardware.usb.UsbDevice
|
import android.hardware.usb.UsbDevice
|
||||||
import android.hardware.usb.UsbDeviceConnection
|
import android.hardware.usb.UsbDeviceConnection
|
||||||
import android.hardware.usb.UsbManager
|
import android.hardware.usb.UsbManager
|
||||||
|
import android.os.Build
|
||||||
import android.os.Bundle
|
import android.os.Bundle
|
||||||
import android.os.IBinder
|
import android.os.IBinder
|
||||||
import android.util.Log
|
import android.util.Log
|
||||||
import android.view.Menu
|
import android.view.Menu
|
||||||
import android.widget.Toast
|
import android.widget.Toast
|
||||||
import androidx.activity.viewModels
|
import androidx.activity.viewModels
|
||||||
|
import androidx.annotation.RequiresApi
|
||||||
import androidx.appcompat.app.AppCompatActivity
|
import androidx.appcompat.app.AppCompatActivity
|
||||||
import androidx.core.content.ContextCompat
|
import androidx.core.content.ContextCompat
|
||||||
import androidx.core.view.get
|
import androidx.core.view.get
|
||||||
@@ -43,6 +45,7 @@ open class HemocubeActivity : AppCompatActivity() {
|
|||||||
private val TAG = "HemoCube"
|
private val TAG = "HemoCube"
|
||||||
|
|
||||||
private val broadcastReceiver = object : BroadcastReceiver() {
|
private val broadcastReceiver = object : BroadcastReceiver() {
|
||||||
|
@RequiresApi(Build.VERSION_CODES.O)
|
||||||
override fun onReceive(context: Context, intent: Intent) {
|
override fun onReceive(context: Context, intent: Intent) {
|
||||||
|
|
||||||
synchronized(this) {
|
synchronized(this) {
|
||||||
@@ -81,6 +84,7 @@ open class HemocubeActivity : AppCompatActivity() {
|
|||||||
}
|
}
|
||||||
|
|
||||||
|
|
||||||
|
@RequiresApi(Build.VERSION_CODES.O)
|
||||||
override fun onCreate(savedInstanceState: Bundle?) {
|
override fun onCreate(savedInstanceState: Bundle?) {
|
||||||
super.onCreate(savedInstanceState)
|
super.onCreate(savedInstanceState)
|
||||||
binding = ActivityHemocubeBinding.inflate(layoutInflater)
|
binding = ActivityHemocubeBinding.inflate(layoutInflater)
|
||||||
@@ -105,6 +109,7 @@ open class HemocubeActivity : AppCompatActivity() {
|
|||||||
}
|
}
|
||||||
}
|
}
|
||||||
|
|
||||||
|
@RequiresApi(Build.VERSION_CODES.O)
|
||||||
open fun connectUsb(permissionGranted: Boolean) {
|
open fun connectUsb(permissionGranted: Boolean) {
|
||||||
Log.d(TAG, "connectUsb() called, permission variable = $permissionGranted")
|
Log.d(TAG, "connectUsb() called, permission variable = $permissionGranted")
|
||||||
val manager = getSystemService(Context.USB_SERVICE) as UsbManager
|
val manager = getSystemService(Context.USB_SERVICE) as UsbManager
|
||||||
@@ -125,32 +130,40 @@ open class HemocubeActivity : AppCompatActivity() {
|
|||||||
}
|
}
|
||||||
|
|
||||||
|
|
||||||
@SuppressLint("MutableImplicitPendingIntent")
|
@RequiresApi(Build.VERSION_CODES.O)
|
||||||
|
@SuppressLint("UnspecifiedImmutableFlag")
|
||||||
private fun requestUserPermission(manager: UsbManager, device: UsbDevice) {
|
private fun requestUserPermission(manager: UsbManager, device: UsbDevice) {
|
||||||
val mPendingIntent: PendingIntent
|
val mPendingIntent: PendingIntent
|
||||||
if (android.os.Build.VERSION.SDK_INT >= android.os.Build.VERSION_CODES.S) {
|
val pendingIntentFlags = when {
|
||||||
mPendingIntent = PendingIntent.getBroadcast(
|
Build.VERSION.SDK_INT >= Build.VERSION_CODES.S -> {
|
||||||
this, 0, Intent(Constants.HEMOCUBE_USB_PERMISSION), PendingIntent.FLAG_MUTABLE
|
PendingIntent.FLAG_IMMUTABLE
|
||||||
)
|
}
|
||||||
} else {
|
else -> {
|
||||||
mPendingIntent = PendingIntent.getBroadcast(
|
|
||||||
this,
|
|
||||||
0,
|
|
||||||
Intent(Constants.HEMOCUBE_USB_PERMISSION),
|
|
||||||
PendingIntent.FLAG_ONE_SHOT or PendingIntent.FLAG_IMMUTABLE
|
PendingIntent.FLAG_ONE_SHOT or PendingIntent.FLAG_IMMUTABLE
|
||||||
)
|
}
|
||||||
}
|
}
|
||||||
|
|
||||||
|
mPendingIntent = PendingIntent.getBroadcast(
|
||||||
|
this,
|
||||||
|
0,
|
||||||
|
Intent(Constants.HEMOCUBE_USB_PERMISSION),
|
||||||
|
pendingIntentFlags
|
||||||
|
)
|
||||||
|
|
||||||
val filter = IntentFilter(Constants.HEMOCUBE_USB_PERMISSION)
|
val filter = IntentFilter(Constants.HEMOCUBE_USB_PERMISSION)
|
||||||
registerReceiver(broadcastReceiver, filter)
|
registerReceiver(broadcastReceiver, filter, RECEIVER_EXPORTED)
|
||||||
|
|
||||||
|
// Request permission
|
||||||
manager.requestPermission(device, mPendingIntent)
|
manager.requestPermission(device, mPendingIntent)
|
||||||
}
|
}
|
||||||
|
|
||||||
|
|
||||||
fun setupService() {
|
fun setupService() {
|
||||||
val intent = Intent(this, UsbService::class.java)
|
val intent = Intent(this, UsbService::class.java)
|
||||||
bindService(intent, connection, Context.BIND_AUTO_CREATE)
|
bindService(intent, connection, Context.BIND_AUTO_CREATE)
|
||||||
}
|
}
|
||||||
|
|
||||||
|
@RequiresApi(Build.VERSION_CODES.O)
|
||||||
open fun reconnectDevice() {
|
open fun reconnectDevice() {
|
||||||
mService.disconnect()
|
mService.disconnect()
|
||||||
unbindService(connection)
|
unbindService(connection)
|
||||||
|
|||||||
@@ -156,7 +156,7 @@ class TrueHemeFragment : Fragment() {
|
|||||||
when (it) {
|
when (it) {
|
||||||
is Result.Success -> {
|
is Result.Success -> {
|
||||||
uploadedToMolbio = true
|
uploadedToMolbio = true
|
||||||
if (Constants.MOLBIO_INTERGATION) {
|
if (Constants.MOLBIO_INTEGRATION) {
|
||||||
it.data.data?.get(0)?.rawData?.let { it1 ->
|
it.data.data?.get(0)?.rawData?.let { it1 ->
|
||||||
hemoCubeViewModel.updateMolbioFlag(
|
hemoCubeViewModel.updateMolbioFlag(
|
||||||
it1._id
|
it1._id
|
||||||
|
|||||||
5
app/src/main/res/drawable/downloads.xml
Normal file
5
app/src/main/res/drawable/downloads.xml
Normal file
@@ -0,0 +1,5 @@
|
|||||||
|
<vector android:height="24dp" android:tint="@color/primary"
|
||||||
|
android:viewportHeight="24" android:viewportWidth="24"
|
||||||
|
android:width="24dp" xmlns:android="http://schemas.android.com/apk/res/android">
|
||||||
|
<path android:fillColor="@color/primary" android:pathData="M19,9h-4V3H9v6H5l7,7 7,-7zM5,18v2h14v-2H5z"/>
|
||||||
|
</vector>
|
||||||
@@ -108,4 +108,33 @@
|
|||||||
app:layout_constraintStart_toStartOf="parent"
|
app:layout_constraintStart_toStartOf="parent"
|
||||||
app:layout_constraintTop_toBottomOf="@id/btn_calibration" />
|
app:layout_constraintTop_toBottomOf="@id/btn_calibration" />
|
||||||
|
|
||||||
|
|
||||||
|
<com.google.android.material.button.MaterialButton
|
||||||
|
android:id="@+id/btn_firefox"
|
||||||
|
android:layout_width="match_parent"
|
||||||
|
android:layout_height="wrap_content"
|
||||||
|
android:layout_marginHorizontal="16dp"
|
||||||
|
android:layout_marginTop="24dp"
|
||||||
|
android:clickable="false"
|
||||||
|
android:text="@string/Firefox"
|
||||||
|
android:textColor="@color/white"
|
||||||
|
app:cornerRadius="16dp"
|
||||||
|
app:layout_constraintEnd_toEndOf="parent"
|
||||||
|
app:layout_constraintStart_toStartOf="parent"
|
||||||
|
app:layout_constraintTop_toBottomOf="@id/btn_deviceProvision" />
|
||||||
|
|
||||||
|
<com.google.android.material.button.MaterialButton
|
||||||
|
android:id="@+id/btn_files"
|
||||||
|
android:layout_width="match_parent"
|
||||||
|
android:layout_height="wrap_content"
|
||||||
|
android:layout_marginHorizontal="16dp"
|
||||||
|
android:layout_marginTop="24dp"
|
||||||
|
android:clickable="false"
|
||||||
|
android:text="@string/Files"
|
||||||
|
android:textColor="@color/white"
|
||||||
|
app:cornerRadius="16dp"
|
||||||
|
app:layout_constraintEnd_toEndOf="parent"
|
||||||
|
app:layout_constraintStart_toStartOf="parent"
|
||||||
|
app:layout_constraintTop_toBottomOf="@id/btn_firefox" />
|
||||||
|
|
||||||
</androidx.constraintlayout.widget.ConstraintLayout>
|
</androidx.constraintlayout.widget.ConstraintLayout>
|
||||||
@@ -115,6 +115,8 @@
|
|||||||
<string name="assurance_controls">Quality Assurance</string>
|
<string name="assurance_controls">Quality Assurance</string>
|
||||||
<string name="calibration">Calibration</string>
|
<string name="calibration">Calibration</string>
|
||||||
<string name="deviceProvision">Device Provision</string>
|
<string name="deviceProvision">Device Provision</string>
|
||||||
|
<string name="Firefox">Firefox</string>
|
||||||
|
<string name="Files">Files</string>
|
||||||
<string name="deviceinfo">Device Information</string>
|
<string name="deviceinfo">Device Information</string>
|
||||||
<string name="place_buffer">Start</string>
|
<string name="place_buffer">Start</string>
|
||||||
<string name="Start_Sample">Start Sample</string>
|
<string name="Start_Sample">Start Sample</string>
|
||||||
|
|||||||
@@ -318,21 +318,21 @@ class HemoCubeFragmentTest {
|
|||||||
|
|
||||||
@Test
|
@Test
|
||||||
fun testDeviceRatioClassificationNormal() {
|
fun testDeviceRatioClassificationNormal() {
|
||||||
val ratio = 0.25
|
val ratio = 0.22
|
||||||
val result = hemoCubeFragment.deviceRatioClassification(ratio)
|
val result = hemoCubeFragment.deviceRatioClassification(ratio)
|
||||||
assertEquals("Normal", result)
|
assertEquals("Normal", result)
|
||||||
}
|
}
|
||||||
|
|
||||||
@Test
|
@Test
|
||||||
fun testDeviceRatioClassificationNegativeBorderline() {
|
fun testDeviceRatioClassificationNegativeBorderline() {
|
||||||
val ratio = 0.31
|
val ratio = 0.235
|
||||||
val result = hemoCubeFragment.deviceRatioClassification(ratio)
|
val result = hemoCubeFragment.deviceRatioClassification(ratio)
|
||||||
assertEquals("Negative Borderline, Repeat Test", result)
|
assertEquals("Negative Borderline", result)
|
||||||
}
|
}
|
||||||
|
|
||||||
@Test
|
@Test
|
||||||
fun testDeviceRatioClassificationSickleCellTrait() {
|
fun testDeviceRatioClassificationSickleCellTrait() {
|
||||||
val ratio = 0.34
|
val ratio = 0.25
|
||||||
val result = hemoCubeFragment.deviceRatioClassification(ratio)
|
val result = hemoCubeFragment.deviceRatioClassification(ratio)
|
||||||
assertEquals("Sickle Cell Trait", result)
|
assertEquals("Sickle Cell Trait", result)
|
||||||
}
|
}
|
||||||
@@ -357,4 +357,46 @@ class HemoCubeFragmentTest {
|
|||||||
val result = hemoCubeFragment.deviceRatioClassification(ratio)
|
val result = hemoCubeFragment.deviceRatioClassification(ratio)
|
||||||
assertEquals("Invalid", result)
|
assertEquals("Invalid", result)
|
||||||
}
|
}
|
||||||
|
|
||||||
|
@Test
|
||||||
|
fun findResultWithAdditionalMethods_ValidInput_ReturnsNegativeBorderlineRepeatTest() {
|
||||||
|
// `when`(hemoCubeFragment.findResultWithAdditionalMethods(0.5, "Normal", 70.0)).thenReturn("Negative Borderline, Repeat Test")
|
||||||
|
val result = hemoCubeFragment.findResultWithAdditionalMethods(0.5, "Normal", 70.0)
|
||||||
|
assertEquals("Negative Borderline, Repeat Test", result)
|
||||||
|
}
|
||||||
|
|
||||||
|
@Test
|
||||||
|
fun findResultWithAdditionalMethods_NormalDeviceRatio_ReturnsNormalBelowSlopeRatioThreshold() {
|
||||||
|
// `when`(hemoCubeFragment.findResultWithAdditionalMethods(0.5, "Normal", 70.0)).thenReturn("Negative Borderline, Repeat Test")
|
||||||
|
val result = hemoCubeFragment.findResultWithAdditionalMethods(0.5, "Normal", 30.0)
|
||||||
|
assertEquals("Normal", result)
|
||||||
|
}
|
||||||
|
|
||||||
|
@Test
|
||||||
|
fun findResultWithAdditionalMethods_NBL_ReturnsNBL() {
|
||||||
|
// `when`(hemoCubeFragment.findResultWithAdditionalMethods(0.5, "Abnormal", 70.0)).thenReturn("Invalid")
|
||||||
|
val result = hemoCubeFragment.findResultWithAdditionalMethods(0.5, "Negative Borderline, Repeat Test", 70.0)
|
||||||
|
assertEquals("Negative Borderline, Repeat Test", result)
|
||||||
|
}
|
||||||
|
|
||||||
|
@Test
|
||||||
|
fun findResultWithAdditionalMethods_SCT_ReturnsSCT() {
|
||||||
|
// `when`(hemoCubeFragment.findResultWithAdditionalMethods(0.5, "Abnormal", 70.0)).thenReturn("Invalid")
|
||||||
|
val result = hemoCubeFragment.findResultWithAdditionalMethods(0.5, "Sickle Cell Trait", 70.0)
|
||||||
|
assertEquals("Sickle Cell Trait", result)
|
||||||
|
}
|
||||||
|
|
||||||
|
@Test
|
||||||
|
fun findResultWithAdditionalMethods_PBL_ReturnsPBL() {
|
||||||
|
// `when`(hemoCubeFragment.findResultWithAdditionalMethods(0.5, "Abnormal", 70.0)).thenReturn("Invalid")
|
||||||
|
val result = hemoCubeFragment.findResultWithAdditionalMethods(0.5, "Positive for Sickle Cell. HPLC for Confirmation", 70.0)
|
||||||
|
assertEquals("Positive for Sickle Cell. HPLC for Confirmation", result)
|
||||||
|
}
|
||||||
|
|
||||||
|
@Test
|
||||||
|
fun findResultWithAdditionalMethods_SCD_ReturnsSCD() {
|
||||||
|
// `when`(hemoCubeFragment.findResultWithAdditionalMethods(0.5, "Abnormal", 70.0)).thenReturn("Invalid")
|
||||||
|
val result = hemoCubeFragment.findResultWithAdditionalMethods(0.5, "Sickle Cell Disease", 70.0)
|
||||||
|
assertEquals("Sickle Cell Disease", result)
|
||||||
|
}
|
||||||
}
|
}
|
||||||
Reference in New Issue
Block a user