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Added Text files for baseline and run

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This commit is contained in:
Ramandeep
2022-02-25 02:35:59 +05:30
parent b87b1220c5
commit 0da7b600a7
4 changed files with 447 additions and 34 deletions
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8
app/build.gradle
View File

@@ -10,6 +10,7 @@ android {
targetSdkVersion 30
versionCode 1
versionName "1.0"
multiDexEnabled true
testInstrumentationRunner "androidx.test.runner.AndroidJUnitRunner"
}
@@ -24,6 +25,9 @@ android {
sourceCompatibility JavaVersion.VERSION_1_8
targetCompatibility JavaVersion.VERSION_1_8
}
configurations.all {
resolutionStrategy.force 'com.google.android.gms:play-services-base:17.1.0'
}
}
dependencies {
@@ -33,9 +37,13 @@ dependencies {
implementation 'com.google.android.material:material:1.0.0'
implementation 'com.github.felHR85:UsbSerial:6.1.0'
implementation 'com.github.ybq:Android-SpinKit:1.4.0'
implementation 'com.google.android.gms:play-services-base:17.1.0'
implementation 'org.apache.poi:poi:4.0.0'
implementation 'org.apache.poi:poi-ooxml:4.0.0'
testImplementation 'junit:junit:4.12'
androidTestImplementation 'androidx.test.ext:junit:1.1.1'
androidTestImplementation 'androidx.test.espresso:espresso-core:3.2.0'
implementation 'com.karumi:dexter:6.2.2'
}

64
app/src/main/AndroidManifest.xml
View File

@@ -1,30 +1,78 @@
<?xml version="1.0" encoding="utf-8"?>
<manifest xmlns:android="http://schemas.android.com/apk/res/android"
xmlns:tools="http://schemas.android.com/tools"
package="shanmukha.in.sickle_cell">
<uses-feature android:name="android.hardware.usb.host" />
<uses-permission android:name="android.permission.WRITE_EXTERNAL_STORAGE" />
<uses-permission android:name="android.permission.READ_EXTERNAL_STORAGE" />
<uses-permission android:name="android.permission.CAMERA" />
<uses-permission android:name="android.permission.WRITE_EXTERNAL_STORAGE" />
<uses-permission android:name="android.permission.ACCESS_COARSE_LOCATION" />
<uses-permission android:name="android.permission.ACCESS_NETWORK_STATE" />
<uses-permission android:name="android.permission.INTERNET" />
<uses-permission android:name="android.permission.ACCESS_FINE_LOCATION" />
<uses-permission android:name="android.permission.READ_EXTERNAL_STORAGE" />
<uses-permission android:name="android.permission.WRITE_EXTERNAL_STORAGE" />
<uses-permission android:name="android.permission.QUERY_ALL_PACKAGES" tools:ignore="QueryAllPackagesPermission" />
<uses-permission android:name="android.permission.WRITE_EXTERNAL_STORAGE"/>
<uses-permission android:name="android.permission.QUERY_ALL_PACKAGES" tools:ignore="QueryAllPackagesPermission" />
<uses-permission android:name="android.permission.MANAGE_EXTERNAL_STORAGE" />
<uses-permission android:name="android.permission.MANAGE_EXTERNAL_STORAGE"
tools:ignore="ScopedStorage" />
<uses-permission android:name="android.permission.ACCESS_COARSE_LOCATION" />
<uses-permission android:name="android.permission.ACCESS_NETWORK_STATE" />
<uses-permission android:name="android.permission.INTERNET" />
<uses-permission android:name="android.permission.ACCESS_FINE_LOCATION" />
<uses-permission android:name="android.permission.READ_EXTERNAL_STORAGE" />
<uses-permission android:name="android.permission.WRITE_EXTERNAL_STORAGE" />
<uses-permission android:name="android.permission.WRITE_EXTERNAL_STORAGE" />
<uses-permission android:name="android.permission.READ_EXTERNAL_STORAGE" />
<uses-permission android:name="android.permission.ACCESS_MEDIA_LOCATION"/>
<uses-permission
android:name="android.permission.MANAGE_EXTERNAL_STORAGE"
tools:ignore="ScopedStorage" />
<application
android:requestLegacyExternalStorage="true"
android:preserveLegacyExternalStorage="true"
android:allowBackup="true"
android:icon="@drawable/shanmukha_logo_small"
android:label="@string/app_name"
android:roundIcon="@drawable/shanmukha_logo_small"
android:supportsRtl="true"
android:theme="@style/AppTheme">
<activity android:name="shanmukha.in.sickle_cell.UI.SplashScreen" android:screenOrientation="portrait"><intent-filter>
<activity
android:name=".UI.SplashScreen"
android:screenOrientation="portrait">
</activity>
<activity
android:name=".UI.SerialData"
android:screenOrientation="portrait">
<intent-filter>
<action android:name="android.intent.action.MAIN" />
<category android:name="android.intent.category.LAUNCHER" />
</intent-filter>
</activity>
<activity android:name="shanmukha.in.sickle_cell.UI.SerialData" android:screenOrientation="portrait"> <intent-filter>
<intent-filter>
<action android:name="android.hardware.usb.action.USB_DEVICE_ATTACHED" />
</intent-filter></activity>
</intent-filter>
</activity>
<provider
android:name="androidx.core.content.FileProvider"
android:authorities="${applicationId}.fileprovider"
android:exported="false"
android:grantUriPermissions="true">
<meta-data
android:name="android.support.FILE_PROVIDER_PATHS"
android:resource="@xml/file_path" />
</provider>
<service
android:name="shanmukha.in.sickle_cell.Service.UsbService"
android:enabled="true">
</service>
android:name=".Service.UsbService"
android:enabled="true"></service>
</application>
</manifest>

213
app/src/main/java/shanmukha/in/sickle_cell/Service/UsbService.java
View File

@@ -1,28 +1,53 @@
package shanmukha.in.sickle_cell.Service;
import android.Manifest;
import android.app.PendingIntent;
import android.app.ProgressDialog;
import android.app.Service;
import android.content.BroadcastReceiver;
import android.content.Context;
import android.content.Intent;
import android.content.IntentFilter;
import android.content.pm.PackageManager;
import android.hardware.usb.UsbDevice;
import android.hardware.usb.UsbDeviceConnection;
import android.hardware.usb.UsbManager;
import android.os.Binder;
import android.os.Environment;
import android.os.Handler;
import android.os.IBinder;
import android.os.Looper;
import android.util.Log;
import android.widget.Toast;
import androidx.core.content.ContextCompat;
import com.felhr.usbserial.CDCSerialDevice;
import com.felhr.usbserial.UsbSerialDevice;
import com.felhr.usbserial.UsbSerialInterface;
import org.apache.poi.hssf.usermodel.HSSFCell;
import org.apache.poi.hssf.usermodel.HSSFRow;
import org.apache.poi.hssf.usermodel.HSSFSheet;
import org.apache.poi.hssf.usermodel.HSSFWorkbook;
import org.apache.poi.poifs.filesystem.POIFSFileSystem;
import org.apache.poi.ss.usermodel.Cell;
import org.apache.poi.ss.usermodel.Row;
import java.io.BufferedReader;
import java.io.BufferedWriter;
import java.io.File;
import java.io.FileInputStream;
import java.io.FileReader;
import java.io.FileWriter;
import java.io.IOException;
import java.io.InputStream;
import java.io.PrintWriter;
import java.io.UnsupportedEncodingException;
import java.math.BigDecimal;
import java.util.ArrayList;
import java.util.HashMap;
import java.util.Iterator;
import java.util.Map;
import shanmukha.in.sickle_cell.Model.PojoParameters;
@@ -32,7 +57,10 @@ import static shanmukha.in.sickle_cell.UI.SerialData.fobj;
public class UsbService extends Service {
private Context appContext;
File filePath1 = null;
File filePath = null;
String directory_path;
private ProgressDialog loadingBar;
public static final String TAG = "UsbService";
public static int tr = 0;
@@ -76,19 +104,21 @@ public class UsbService extends Service {
try {
data = new String(arg0, "UTF-8");
Log.e("data received",data);
data.concat("/n");
if (data.contains(",")) {
appendLog("Hi");
String[] namesList = data.split(",");
BigDecimal d5 = new BigDecimal(namesList[3]);
ddash_427 = (float) (Float.parseFloat(String.valueOf((d5))) - 427.00);
ddash_555 = (float) (Float.parseFloat(String.valueOf((d5))) - 555.00);
ddash_555 = (float) (Float.parseFloat(String.valueOf((d5))) - 539.00);
// ddash_539 = (float) (Float.parseFloat(String.valueOf((d5))) - 539.00);
BigDecimal d3 = new BigDecimal(namesList[2]);
@@ -351,16 +381,16 @@ public class UsbService extends Service {
@Override
public void run() {
while (true) {
byte[] buffer = new byte[100];
byte[] buffer = new byte[81024];
int n = serialPort.syncRead(buffer, 0);
if (n > 0) {
byte[] received = new byte[n];
System.arraycopy(buffer, 0, received, 0, n);
String receivedStr = new String(received);
// Log.e("Recived Data", receivedStr);
String data = null;
data = new String(received);
Log.e("Recived Data",data);
data.concat("/n");
if (fobj.getConnect_flag() == 1) {
@@ -442,6 +472,8 @@ public class UsbService extends Service {
}
if (fobj.getRun_flag() == 1) {
if (data.contains(String.valueOf(obj.getX_427()))) {
String ds2 = data.substring(data.lastIndexOf(":") + 1).trim();
f_427 = ds2;
@@ -463,6 +495,12 @@ public class UsbService extends Service {
}
try {
buttonCreateFile1(data);
readfile1();
} catch (IOException e) {
e.printStackTrace();
}
}
@@ -493,7 +531,14 @@ public class UsbService extends Service {
}
try {
buttonCreateFile(data);
readfile();
} catch (IOException e) {
e.printStackTrace();
}
}
@@ -535,5 +580,161 @@ public class UsbService extends Service {
}
}
}
public void appendLog(String text)
{
File logFile = new File("sdcard/log.file");
if (!logFile.exists())
{
try
{
logFile.createNewFile();
}
catch (IOException e)
{
// TODO Auto-generated catch block
e.printStackTrace();
}
}
try
{
//BufferedWriter for performance, true to set append to file flag
BufferedWriter buf = new BufferedWriter(new FileWriter(logFile, true));
buf.append(text);
buf.newLine();
buf.close();
}
catch (IOException e)
{
// TODO Auto-generated catch block
e.printStackTrace();
}
}
public void buttonCreateFile1(String data) throws IOException {
String directory_path = Environment.getExternalStorageDirectory().getPath() + "/Test Report/";
File file = new File(directory_path);
if (!file.exists()) {
file.mkdirs();
}
File file1 = new File(directory_path, "Data_Run" +".txt");
if (!file1.exists()) {
file1.createNewFile();
}
PrintWriter writer = new PrintWriter(file1);
writer.print("");
// other operations
writer.close();
FileWriter writer1 = new FileWriter(file1, true);
writer1.append(data);
writer1.flush();
writer1.close();
}
public void buttonCreateFile(String data) throws IOException {
String directory_path = Environment.getExternalStorageDirectory().getPath() + "/Test Report/";
File file = new File(directory_path);
if (!file.exists()) {
file.mkdirs();
}
File file1 = new File(directory_path, "Data_Baseline" +".txt");
if (!file1.exists()) {
file1.createNewFile();
}
PrintWriter writer = new PrintWriter(file1);
writer.print("");
// other operations
writer.close();
FileWriter writer1 = new FileWriter(file1, true);
writer1.append(data);
writer1.flush();
writer1.close();
}
public void readfile()
{
String directory_path = Environment.getExternalStorageDirectory().getPath() + "/Test Report/";
File file = new File(directory_path, "Data_Baseline" +".txt");
//Get the text file
//Read text from file
StringBuilder text = new StringBuilder();
try {
BufferedReader br = new BufferedReader(new FileReader(file));
String line;
while ((line = br.readLine()) != null) {
Thread.sleep(3);
Log.e("text", line);
/* text.append(line);
text.append('\n');*/
}
br.close();
}
catch (IOException | InterruptedException e) {
//You'll need to add proper error 1handling here
}
//Find the view by its id
}
public void readfile1()
{
String directory_path = Environment.getExternalStorageDirectory().getPath() + "/Test Report/";
File file = new File(directory_path, "Data_Run" +".txt");
//Get the text file
//Read text from file
StringBuilder text = new StringBuilder();
try {
BufferedReader br = new BufferedReader(new FileReader(file));
String line;
while ((line = br.readLine()) != null) {
Thread.sleep(1);
Log.e("text", line);
/* text.append(line);
text.append('\n');*/
}
br.close();
}
catch (IOException | InterruptedException e) {
//You'll need to add proper error 1handling here
}
//Find the view by its id
}
}

186
app/src/main/java/shanmukha/in/sickle_cell/UI/SerialData.java
View File

@@ -1,5 +1,6 @@
package shanmukha.in.sickle_cell.UI;
import android.Manifest;
import android.app.AlertDialog;
import android.app.PendingIntent;
import android.content.BroadcastReceiver;
@@ -10,20 +11,36 @@ import android.content.Intent;
import android.content.IntentFilter;
import android.content.ServiceConnection;
import android.hardware.usb.UsbDevice;
import android.net.Uri;
import android.os.Build;
import android.os.Bundle;
import android.os.Environment;
import android.os.Handler;
import android.os.IBinder;
import android.os.Message;
import android.provider.Settings;
import android.util.Log;
import android.view.View;
import android.widget.Button;
import android.widget.TextView;
import android.widget.Toast;
import androidx.annotation.RequiresApi;
import androidx.appcompat.app.AppCompatActivity;
import androidx.core.app.ActivityCompat;
import com.karumi.dexter.Dexter;
import com.karumi.dexter.MultiplePermissionsReport;
import com.karumi.dexter.PermissionToken;
import com.karumi.dexter.listener.PermissionDeniedResponse;
import com.karumi.dexter.listener.PermissionGrantedResponse;
import com.karumi.dexter.listener.PermissionRequest;
import com.karumi.dexter.listener.multi.MultiplePermissionsListener;
import com.karumi.dexter.listener.single.PermissionListener;
import java.lang.ref.WeakReference;
import java.util.HashMap;
import java.util.List;
import java.util.Map;
import java.util.Set;
@@ -96,6 +113,7 @@ public class SerialData extends AppCompatActivity {
}
};
@Override
protected void onCreate(Bundle savedInstanceState) {
super.onCreate(savedInstanceState);
@@ -104,6 +122,71 @@ public class SerialData extends AppCompatActivity {
mHandler = new MyHandler(this);
textViewTitle = findViewById(R.id.textViewTitle1);
Dexter.withContext(this)
.withPermissions(
Manifest.permission.MANAGE_EXTERNAL_STORAGE,
Manifest.permission.READ_EXTERNAL_STORAGE
).withListener(new MultiplePermissionsListener() {
@RequiresApi(api = Build.VERSION_CODES.R)
@Override public void onPermissionsChecked(MultiplePermissionsReport report) {
if (Build.VERSION.SDK_INT == Build.VERSION_CODES.Q) {
Dexter.withContext(getApplicationContext())
.withPermission(Manifest.permission.READ_EXTERNAL_STORAGE)
.withListener(new PermissionListener() {
@Override
public void onPermissionGranted(PermissionGrantedResponse permissionGrantedResponse) {
Toast.makeText(SerialData.this, "allowed", Toast.LENGTH_SHORT).show();
}
@Override
public void onPermissionDenied(PermissionDeniedResponse permissionDeniedResponse) {
}
@Override
public void onPermissionRationaleShouldBeShown(PermissionRequest permissionRequest, PermissionToken permissionToken) {
permissionToken.continuePermissionRequest();
}
}).check();
ActivityCompat.requestPermissions(SerialData.this,
new String[]{Manifest.permission.READ_EXTERNAL_STORAGE}, 1);
}
else if (!Environment.isExternalStorageManager()) {
Intent intent = new Intent();
intent.setAction(Settings.ACTION_MANAGE_APP_ALL_FILES_ACCESS_PERMISSION);
Uri uri = Uri.fromParts("package", "shanmukha.in.sickle_cell", null);
intent.setData(uri);
startActivity(intent);
Toast.makeText(SerialData.this, "allowed", Toast.LENGTH_SHORT).show();
}
}
@Override public void onPermissionRationaleShouldBeShown(List<PermissionRequest> permissions, PermissionToken token) { token.continuePermissionRequest();
}
}).check();
ActivityCompat.requestPermissions(this,
new String[]{
Manifest.permission.MANAGE_EXTERNAL_STORAGE}, 1);
ActivityCompat.requestPermissions(this,
new String[]{Manifest.permission.READ_EXTERNAL_STORAGE}, 0);
Button sendButton = (Button) findViewById(R.id.buttonSend);
Button baseli = (Button) findViewById(R.id.baseline_c);
Button runi = (Button) findViewById(R.id.run_c);
@@ -139,22 +222,43 @@ public class SerialData extends AppCompatActivity {
try {
String string22 = "led2 50\r";
usbService.write(string22.getBytes());
String string23 = "led1 50\r";
usbService.write(string23.getBytes());
Thread.sleep(2000);
String string1 = "autoset\r";
usbService.write(string1.getBytes());
Thread.sleep(2000);
Thread.sleep(Long.parseLong("1000"));
String string4 = "run\r";
Thread.sleep(2000);
usbService.write(string4.getBytes());
Thread.sleep(2000);
Thread.sleep(2000);
usbService.write(string4.getBytes());
String string22 = "led2 0\r";
usbService.write(string22.getBytes());
Thread.sleep(2000);
String string2 = "autoset\r";
usbService.write(string2.getBytes());
Thread.sleep(2000);
Thread.sleep(Long.parseLong("1000"));
String string6 = "run\r";
Thread.sleep(2000);
usbService.write(string6.getBytes());
Thread.sleep(2000);
int number427 = Integer.valueOf(obj.getX_427());
@@ -322,15 +426,19 @@ public class SerialData extends AppCompatActivity {
Log.e("O 427 pixel ", obj.getO_427());
ab_427 = Math.log10(Double.parseDouble(obj.getI_427())/Double.parseDouble(obj.getF_427()));
ab_555= Math.log10(Double.parseDouble(obj.getI_555())/Double.parseDouble(obj.getF_555()));
ab_427 = Math.log10(Double.parseDouble(obj.getO_427()) / (Double.parseDouble(obj.getI_427()) - Double.parseDouble(obj.getF_427())));
Log.e("ab 427", String.valueOf(ab_427));
/* ab_427 = Math.log10(Double.parseDouble(obj.getO_427()) / (Double.parseDouble(obj.getI_427()) - Double.parseDouble(obj.getF_427())));
Log.e("without log value 427", String.valueOf(Double.parseDouble(obj.getO_427()) / (Double.parseDouble(obj.getI_427()) - Double.parseDouble(obj.getF_427()))));
Log.e("ab 427", String.valueOf(ab_427));
ab_555 = Math.log10(Double.parseDouble(obj.getO_555()) / (Double.parseDouble(obj.getI_555()) - Double.parseDouble(obj.getF_555())));
Log.e("without log value 555", String.valueOf(Double.parseDouble(obj.getO_555()) / (Double.parseDouble(obj.getI_555()) - Double.parseDouble(obj.getF_555()))));
*/
Log.e("ab 555 ", String.valueOf(ab_555));
ratio = ab_555 / ab_427;
@@ -418,6 +526,14 @@ public class SerialData extends AppCompatActivity {
usbService.write(string45.getBytes());
Thread.sleep(4000);
String string23 = "print 1 3694\r";
Thread.sleep(3000);
usbService.write(string23.getBytes());
Thread.sleep(5000);
} catch (Exception e) {
Toast.makeText(SerialData.this, "Perform Run Step Again ", Toast.LENGTH_SHORT).show();
@@ -476,21 +592,32 @@ public class SerialData extends AppCompatActivity {
if (flag == 0) {
String string22 = "led2 50\r";
usbService.write(string22.getBytes());
String string1 = "autoset\r";
usbService.write(string1.getBytes());
try {
String string22 = "led2 25\r";
usbService.write(string22.getBytes());
Thread.sleep(Long.parseLong("1000"));
String string4 = "run\r";
String string7 = "autoset\r";
usbService.write(string7.getBytes());
Thread.sleep(Long.parseLong("1000"));
String string8 = "run\r";
Thread.sleep(2000);
usbService.write(string4.getBytes());
usbService.write(string8.getBytes());
Thread.sleep(2000);
int number427 = Integer.valueOf(obj.getX_427());
@@ -512,6 +639,21 @@ public class SerialData extends AppCompatActivity {
Thread.sleep(4000);
String string23 = "print 1 3694\r";
Thread.sleep(3000);
usbService.write(string23.getBytes());
Thread.sleep(5000);
if (obj.getI_427() == null && "".equals(obj.getI_427())) {
Toast.makeText(SerialData.this, "Perform Baseline Step Again ", Toast.LENGTH_SHORT).show();
@@ -552,6 +694,7 @@ public class SerialData extends AppCompatActivity {
alert.show();
} else {
fobj.setBaseline_flag(1);
fobj.setRun_flag(0);
@@ -597,6 +740,13 @@ public class SerialData extends AppCompatActivity {
Thread.sleep(4000);
String string23 = "print 1 3694\r";
Thread.sleep(3000);
usbService.write(string23.getBytes());
Thread.sleep(5000);
if (obj.getI_427() == null && "".equals(obj.getI_427())) {
@@ -626,6 +776,7 @@ public class SerialData extends AppCompatActivity {
sta.setBase_para_flag(1);
}
@@ -665,9 +816,12 @@ public class SerialData extends AppCompatActivity {
new Handler().postDelayed(new Runnable() {
@Override
public void run() {
String string22 = "read\r";
/* String string22 = "read\r";
usbService.write(string22.getBytes());
*/
String string22 = "read\r";
usbService.write(string22.getBytes());
}
@@ -713,6 +867,7 @@ public class SerialData extends AppCompatActivity {
if (flag == 0) {
new Handler().postDelayed(new Runnable() {
@Override
public void run() {
@@ -721,6 +876,7 @@ public class SerialData extends AppCompatActivity {
usbService.write(string22.getBytes());
}
}, 5000);