add data download api
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3
.gitignore
vendored
3
.gitignore
vendored
@@ -3,4 +3,5 @@ env/
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.DS_Store
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*.xlsx
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*.csv
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*.json
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*.json
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cloud-functions/python/functions/__pycache__/
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88
cloud-functions/python/functions/consolidation.py
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88
cloud-functions/python/functions/consolidation.py
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@@ -0,0 +1,88 @@
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import functions_framework
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from firebase_functions import https_fn
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# import firebase_admin
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from firebase_admin import initialize_app, firestore
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import pandas as pd
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import datetime
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import sys
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import platform
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import os
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import io
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from flask import send_file
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initialize_app()
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@functions_framework.http
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def consolidation(request):
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"""HTTP Cloud Function.
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Args:
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request (flask.Request): The request object.
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<https://flask.palletsprojects.com/en/1.1.x/api/#incoming-request-data>
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Returns:
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The response text, or any set of values that can be turned into a
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Response object using `make_response`
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<https://flask.palletsprojects.com/en/1.1.x/api/#flask.make_response>.
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"""
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request_json = request.get_json(silent=True)
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request_args = request.args
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if request_json and 'start_date' in request_json and 'end_date' in request_json:
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start_date = request_json['start_date']
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end_date = request_json['end_date']
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elif request_args and 'start_date' in request_args and 'end_date' in request_args:
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start_date = request_args['start_date']
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end_date = request_args['end_date']
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else:
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start_date = "2023-08-20"
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end_date = "2023-08-21"
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path_delim = "/"
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db = firestore.client()
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patient_collection = db.collection("patientData")
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test_collection = db.collection("testData")
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query = test_collection
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patient_docs = query.stream()
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data = []
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for patient_doc in patient_docs:
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patient_data = patient_doc.to_dict()
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patient_id = patient_data["_id"]
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test_docs = test_collection.where("_id", "==", patient_id).stream()
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for test_doc in test_docs:
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test_data = test_doc.to_dict()
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combined_data = {**patient_data, **test_data}
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for key, value in combined_data.items():
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if value == "" and key in patient_data:
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combined_data[key] = patient_data[key]
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data.append(combined_data)
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df = pd.DataFrame(data)
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output_filename = "data.xlsx"
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output_path = os.getcwd() + path_delim + output_filename
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writer = pd.ExcelWriter(output_path, engine = 'openpyxl')
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df = df[(df['testTime'] > start_date) & (df['testTime'] <= end_date)]
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df = df.sort_values(by=['testTime'], ascending=False)
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df = df.drop(['resultData', "reportUploadTime", "userImageURL", "testType", "birthYear", "testStatus", "reportPath", "createdBy", "csvPath", "result", "mobileId", "resultRatio", "localFlag", "led2", "led1"], axis=1)
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df.rename(columns={'deviceSerialNumber': "loginId", "calculatedRatio": "calibratedRatio"}, inplace = True)
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df.to_excel(writer, sheet_name = 'data', index=False)
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writer.close()
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# firebase_admin.delete_app(firebase_admin.get_app())
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# return 'df size {}!'.format(df.size)
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with open(output_path,'rb') as f:
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file_data = io.BytesIO(f.read())
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# application/vnd.ms-excel
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return send_file(file_data, download_name= "data.xlsx", mimetype="application/vnd.openxmlformats-officedocument.spreadsheetml.sheet")
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@@ -1,7 +1,12 @@
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# Deploy with `firebase deploy`
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from firebase_functions import https_fn
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from firebase_admin import initialize_app
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from firebase_admin import initialize_app, firestore
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import pandas as pd
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import datetime
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import sys
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import platform
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import os
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# initialize_app()
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#
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@@ -10,8 +15,69 @@ from firebase_admin import initialize_app
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# def on_request_example(req: https_fn.Request) -> https_fn.Response:
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# return https_fn.Response("Hello world!")
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# @https_fn.on_request(
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# cors=options.CorsOptions(
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# cors_origins=[r"firebase\.com$", r"https://flutter\.com"],
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# cors_methods=["get", "post"],
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# )
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# )
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initialize_app()
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@https_fn.on_request()
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def on_request_example(req: https_fn.Request) -> https_fn.Response:
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return https_fn.Response("Hello world!")
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def consolidation(req: https_fn.Request) -> https_fn.Response:
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path_delim = "/"
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db = firestore.client()
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patient_collection = db.collection("patientData")
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test_collection = db.collection("testData")
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start_date = req.query.start_date
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print("start_date", start_date)
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end_date = req.query.end_date
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print("end_date", end_date)
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query = test_collection # test_collection.where(filter=FieldFilter("testTime", ">=", start_date)).where(filter=FieldFilter("testTime", "<", end_date))
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patient_docs = query.stream()
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data = []
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for patient_doc in patient_docs:
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patient_data = patient_doc.to_dict()
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patient_id = patient_data["_id"]
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test_docs = test_collection.where("_id", "==", patient_id).stream()
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for test_doc in test_docs:
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test_data = test_doc.to_dict()
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combined_data = {**patient_data, **test_data}
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for key, value in combined_data.items():
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if value == "" and key in patient_data:
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combined_data[key] = patient_data[key]
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data.append(combined_data)
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df = pd.DataFrame(data)
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output_filename = "data.xlsx"
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df.to_csv(output_filename, index=False)
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output_path = os.getcwd() + path_delim + output_filename
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writer = pd.ExcelWriter(output_path, engine = 'openpyxl')
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df = df[(df['testTime'] > start_date) & (df['testTime'] <= end_date)]
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df = df.sort_values(by=['testTime'], ascending=False)
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df = df.drop(['resultData', "reportUploadTime", "userImageURL", "testType", "birthYear", "testStatus", "reportPath", "createdBy", "csvPath", "result", "mobileId", "resultRatio", "localFlag", "led2", "led1"], axis=1)
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df.to_excel(writer, sheet_name = 'data', index=False)
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writer.close()
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firebase_admin.delete_app(firebase_admin.get_app())
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# return https_fn.Response(response = send_file(output_path))
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return https_fn.Response("Ok!")
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@@ -1 +1,4 @@
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firebase_functions~=0.1.0
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functions-framework==3.*
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firebase_functions~=0.1.0
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pandas==2.0.3
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openpyxl==3.1.2
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42
requirements.txt
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42
requirements.txt
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@@ -0,0 +1,42 @@
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CacheControl==0.13.1
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cachetools==5.3.1
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certifi==2023.7.22
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cffi==1.15.1
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charset-normalizer==3.2.0
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cryptography==41.0.3
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et-xmlfile==1.1.0
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firebase-admin==6.2.0
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google-api-core==2.11.1
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google-api-python-client==2.97.0
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google-auth==2.22.0
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google-auth-httplib2==0.1.0
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google-cloud-core==2.3.3
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google-cloud-firestore==2.11.1
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google-cloud-storage==2.10.0
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google-crc32c==1.5.0
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google-resumable-media==2.5.0
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googleapis-common-protos==1.60.0
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grpcio==1.57.0
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grpcio-status==1.57.0
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httplib2==0.22.0
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idna==3.4
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msgpack==1.0.5
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numpy==1.25.2
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openpyxl==3.1.2
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pandas==2.0.3
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proto-plus==1.22.3
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protobuf==4.24.0
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pyasn1==0.5.0
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pyasn1-modules==0.3.0
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pycparser==2.21
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PyJWT==2.8.0
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pyparsing==3.1.1
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python-dateutil==2.8.2
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pytz==2023.3
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requests==2.31.0
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rsa==4.9
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six==1.16.0
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tzdata==2023.3
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uritemplate==4.1.1
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urllib3==1.26.16
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XlsxWriter==3.1.2
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@@ -77,4 +77,4 @@ if __name__ == "__main__":
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print(f"Data saved to '{output_path}'")
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# Close the Firebase Admin SDK
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firebase_admin.delete_app(firebase_admin.get_app())
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# firebase_admin.delete_app(firebase_admin.get_app())
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