smiuser/hpos
1
0
Fork 0
Code Issues Pull Requests Actions Packages Projects Releases 4 Wiki Activity

Merge branch 'main' of https://github.com/surya-x/sickle-cell-updated into navigation-db

Browse Source 
Updated to main.
This commit is contained in:
vsuryakumar
2023-02-13 13:09:46 +05:30
parent 0b6d78dfbb ab268ee0a8
commit b22de3cf8b
27 changed files with 15655 additions and 193 deletions
Download Patch File Download Diff File Expand all files Collapse all files

14
app/src/main/AndroidManifest.xml
View File

@@ -39,16 +39,16 @@
android:exported="false"
android:windowSoftInputMode="adjustPan"
android:parentActivityName="com.example.hpos.presentation.MainActivity">
<!-- <intent-filter>-->
<!-- <action android:name="android.hardware.usb.action.USB_DEVICE_ATTACHED" />-->
<!-- </intent-filter>-->
<!-- <intent-filter>-->
<!-- <action android:name="android.hardware.usb.action.USB_DEVICE_ATTACHED" />-->
<!-- </intent-filter>-->
<!-- <meta-data-->
<!-- android:name="android.hardware.usb.action.USB_DEVICE_ATTACHED"-->
<!-- android:resource="@xml/device_filter" />-->
<!-- <meta-data-->
<!-- android:name="android.hardware.usb.action.USB_DEVICE_ATTACHED"-->
<!-- android:resource="@xml/device_filter" />-->
</activity>
<!-- android:theme="@style/Theme.HPOS.ActionBar"-->
<!-- android:theme="@style/Theme.HPOS.ActionBar"-->
<activity
android:name="com.example.hpos.presentation.MainActivity"
android:exported="true">

7
app/src/main/java/com/example/hpos/data/DataHolder.kt
View File

@@ -2,10 +2,12 @@ package com.example.hpos.data
import androidx.lifecycle.MutableLiveData
import com.example.hpos.data.model.TestRightDeviceConstants
import com.example.hpos.data.model.TestType
object DataHolder {
// var usbConnected: Boolean = false
// val usbConnected = MutableLiveData(false)
var selectedTestType: TestType = TestType.SICKLECERT
val usbConnected = MutableLiveData(true)
var isStoragePermissionGranted = false
@@ -15,6 +17,7 @@ object DataHolder {
var sampleReadCounter = 0
var deviceConstant: TestRightDeviceConstants? = null
var deviceSerialNumber: String = "ABCD"
/* Contains wavelength -> pixel no.*/
val wavelengthToPixelArray = ArrayList<Double>()

27
app/src/main/java/com/example/hpos/data/PreferenceUtility.kt Normal file
View File

@@ -0,0 +1,27 @@
package com.example.hpos.data
import android.content.Context
import android.content.SharedPreferences
object PreferenceUtility {
private const val PREFS_NAME = "keys_prefs"
private const val KEY_COUNTER = "counter"
fun generateId(context: Context, prefix: String): String {
val prefs: SharedPreferences =
context.getSharedPreferences(PREFS_NAME, Context.MODE_PRIVATE)
val counter = prefs.getInt(KEY_COUNTER, 100)
prefs.edit().putInt(KEY_COUNTER, counter + 1).apply()
return prefix + counter
}
fun generateId(context: Context): String {
val prefs: SharedPreferences =
context.getSharedPreferences(PREFS_NAME, Context.MODE_PRIVATE)
val counter = prefs.getInt(KEY_COUNTER, 100)
prefs.edit().putInt(KEY_COUNTER, counter + 1).apply()
return counter.toString()
}
}

7
app/src/main/java/com/example/hpos/data/constant/Constants.kt
View File

@@ -9,7 +9,7 @@ object Constants {
const val TEST_RIGHT_TOTAL_PIXEL = 3694
const val MAXIMUM_TEST_ALLOWED_BEFORE_REFERENCE = 40
const val MAXIMUM_TEST_ALLOWED_BEFORE_REFERENCE = 9999
const val RANGE_IN_RESULT_CALCULATIONS = 10
@@ -21,4 +21,9 @@ object Constants {
const val DEVICE_PRODUCT_ID = 24597
const val DEVICE_VENDOR_ID = 1027
const val ERROR_NORMAL = 400
const val ERROR_CRITICAL = 401
const val NO_OF_TIMES_TO_RUN_SAMPLE = 1
}

6
app/src/main/java/com/example/hpos/data/model/ErrorMessage.kt Normal file
View File

@@ -0,0 +1,6 @@
package com.example.hpos.data.model
data class ErrorMessage (
val message: String,
val code: Int
)

1
app/src/main/java/com/example/hpos/data/model/TestInfo.kt
View File

@@ -4,7 +4,6 @@ data class TestInfo(
val value: String,
val number1: String,
val number2: String,
val device: DeviceType,
val result: String,
val resultConfirmatory: String,
val directoryPath: String,

6
app/src/main/java/com/example/hpos/data/model/TestType.kt Normal file
View File

@@ -0,0 +1,6 @@
package com.example.hpos.data.model
enum class TestType {
SICKLECERT,
SICKLEFIND
}

22
app/src/main/java/com/example/hpos/domain/ResultCalculationWithMaxImpl.kt
View File

@@ -57,16 +57,24 @@ class ResultCalculationWithMaxImpl : TestRightResultCalculation {
val value = absorbanceAtWaveTwo / absorbanceAtWaveOne
testRightCalculationData.ratioValue = value
if (value < 0.24 || value == 0.0) {
if (value < 0.28 || value == 0.0) {
testRightCalculationData.ratioMinRange = 0.0
testRightCalculationData.ratioMaxRange = 0.24
testRightCalculationData.ratioMaxRange = 0.28
return TestRightResultType.NORMAL
} else if (value >= 0.24 && value < 0.30) {
testRightCalculationData.ratioMinRange = 0.24
testRightCalculationData.ratioMaxRange = 0.30
} else if (value >= 0.28 && value < 0.285) {
testRightCalculationData.ratioMinRange = 0.28
testRightCalculationData.ratioMaxRange = 0.285
return TestRightResultType.UNDEFINED
} else if (value >= 0.285 && value < 0.52) {
testRightCalculationData.ratioMinRange = 0.285
testRightCalculationData.ratioMaxRange = 0.52
return TestRightResultType.SICKLECELLTRAIT
} else if (value >= 0.30) {
testRightCalculationData.ratioMinRange = 0.30
} else if (value >= 0.52 && value < 0.525) {
testRightCalculationData.ratioMinRange = 0.52
testRightCalculationData.ratioMaxRange = 0.525
return TestRightResultType.UNDEFINED
}else if (value >= 0.525) {
testRightCalculationData.ratioMinRange = 0.525
testRightCalculationData.ratioMaxRange = 999.0
return TestRightResultType.SICKLECELLDISEASE
}

143
app/src/main/java/com/example/hpos/domain/SaveRawData.kt
View File

@@ -1,6 +1,8 @@
package com.example.hpos.domain
import android.util.Log
import com.example.hpos.data.constant.Constants
import com.example.hpos.data.model.PatientData
import com.example.hpos.data.model.TestRightCalculationData
import com.opencsv.CSVWriter
import java.io.File
@@ -9,30 +11,39 @@ import java.util.Collections.sort
class SaveRawData {
private val TAG = "saverawdata"
fun saveCsv(folderPath: String, fileName: String, matrix: ArrayList<ArrayList<Double>>) {
// try {
val fullPath = "$folderPath/$fileName"
val writer = CSVWriter(FileWriter(fullPath))
val fullPath = "$folderPath/$fileName"
val writer = CSVWriter(FileWriter(fullPath))
sort(matrix) { one: ArrayList<Double>, two: ArrayList<Double> ->
one[0].compareTo(two[0])
}
val content = ArrayList<Array<String>>()
content.add(arrayOf("NM", "CA"))
for (eachRow in matrix){
if (eachRow[0] >= Constants.MIN_WAVELENGTH_RANGE_TO_RECORD && eachRow[0] < Constants.MAX_WAVELENGTH_RANGE_TO_RECORD+1) {
// val rowContent = arrayOf(String.format("%.3f", eachRow[0]), String.format("%.3f", eachRow[1]))
val rowContent =
arrayOf(String.format("%.10f", eachRow[0]), String.format("%.10f", eachRow[1]))
content.add(rowContent)
sort(matrix) { one: ArrayList<Double>, two: ArrayList<Double> ->
one[0].compareTo(two[0])
}
}
writer.writeAll(content) // data is adding to csv
writer.close()
val content = ArrayList<Array<String>>()
content.add(arrayOf("NM", "CA"))
for (eachRow in matrix) {
if (eachRow[0] >= Constants.MIN_WAVELENGTH_RANGE_TO_RECORD && eachRow[0] < Constants.MAX_WAVELENGTH_RANGE_TO_RECORD + 1) {
// val rowContent = arrayOf(String.format("%.3f", eachRow[0]), String.format("%.3f", eachRow[1]))
val rowContent =
arrayOf(
String.format("%.10f", eachRow[0]),
String.format("%.10f", eachRow[1])
)
content.add(rowContent)
}
}
writer.writeAll(content) // data is adding to csv
writer.close()
// } catch (e: Exception) {
// Log.e(TAG, e.toString())
// }
}
fun saveLog(folderPath: String, fileName: String, calculationData: TestRightCalculationData) {
@@ -44,16 +55,100 @@ class SaveRawData {
writer.close()
}
fun getLogStringFromObj(calculationData: TestRightCalculationData) : String {
fun getLogStringFromObj(calculationData: TestRightCalculationData): String {
var outputString = "Test calculation logs ==>\n"
outputString += "Absorbance one = ${String.format("%.3f", calculationData.absorbanceOne)}, found at wavelength = ${String.format("%.3f", calculationData.wavelengthOfAbsorbanceOne)}\n"
outputString += "Absorbance two = ${String.format("%.3f", calculationData.absorbanceTwo)}, found at wavelength = ${String.format("%.3f", calculationData.wavelengthOfAbsorbanceTwo)}\n"
outputString += "Absorbance one = ${
String.format(
"%.3f",
calculationData.absorbanceOne
)
}, found at wavelength = ${
String.format(
"%.3f",
calculationData.wavelengthOfAbsorbanceOne
)
}\n"
outputString += "Absorbance two = ${
String.format(
"%.3f",
calculationData.absorbanceTwo
)
}, found at wavelength = ${
String.format(
"%.3f",
calculationData.wavelengthOfAbsorbanceTwo
)
}\n"
outputString += "Calculated Ratio = ${String.format("%.3f", calculationData.ratioValue)}\n"
outputString += "\tlies in range min value = ${String.format("%.3f", calculationData.ratioMinRange)} & range max value = ${String.format("%.3f", calculationData.ratioMaxRange)}\n"
outputString += "\tlies in range min value = ${
String.format(
"%.3f",
calculationData.ratioMinRange
)
} & range max value = ${String.format("%.3f", calculationData.ratioMaxRange)}\n"
outputString += "Results = ${calculationData.result}\n"
return outputString
}
fun saveLogWithPatientData(
folderPath: String,
fileName: String,
calculationData: TestRightCalculationData,
patientData: PatientData
) {
val fileObj = File(folderPath, fileName)
val writer = FileWriter(fileObj)
writer.append(getLogStringFromObjWithPatientData(calculationData, patientData))
writer.flush()
writer.close()
}
private fun getLogStringFromObjWithPatientData(
calculationData: TestRightCalculationData,
patientData: PatientData
): String {
var outputString = "Test calculation logs ==>\n"
outputString += "Name = ${patientData.name}\n"
outputString += "Age = ${patientData.age}\n"
outputString += "Gender = ${patientData.gender}\n"
outputString += "Absorbance one = ${
String.format(
"%.3f",
calculationData.absorbanceOne
)
}, found at wavelength = ${
String.format(
"%.3f",
calculationData.wavelengthOfAbsorbanceOne
)
}\n"
outputString += "Absorbance two = ${
String.format(
"%.3f",
calculationData.absorbanceTwo
)
}, found at wavelength = ${
String.format(
"%.3f",
calculationData.wavelengthOfAbsorbanceTwo
)
}\n"
outputString += "Calculated Ratio = ${String.format("%.3f", calculationData.ratioValue)}\n"
outputString += "\tlies in range min value = ${
String.format(
"%.3f",
calculationData.ratioMinRange
)
} & range max value = ${String.format("%.3f", calculationData.ratioMaxRange)}\n"
outputString += "Results = ${calculationData.result}\n"
Log.d(TAG, outputString)
return outputString
}
}

36
app/src/main/java/com/example/hpos/domain/SaveRawDataTest.kt
View File

@@ -13,21 +13,33 @@ class SaveRawDataTest {
fun saveCsv(folderPath: String, fileName: String, calculationData: ArrayList<CalculationVariableForTest>) {
val fullPath = "$folderPath/$fileName"
val writer = CSVWriter(FileWriter(fullPath))
val content = ArrayList<Array<String>>()
// try {
val fullPath = "$folderPath/$fileName"
val writer = CSVWriter(FileWriter(fullPath))
val content = ArrayList<Array<String>>()
// Header
var rowContent = arrayOf("pixel no", "wavelength", "invertedPixelNo", "I0", "I", "absorbance")
content.add(rowContent)
for (eachRow in calculationData){
rowContent = arrayOf(eachRow.pixelNo.toString(), eachRow.wavelength.toString(), eachRow.invertedPixelNo.toString(), eachRow.I0.toString(), eachRow.I.toString(), eachRow.absorbance.toString())
// Header
var rowContent =
arrayOf("pixel no", "wavelength", "invertedPixelNo", "I0", "I", "absorbance")
content.add(rowContent)
}
writer.writeAll(content) // data is adding to csv
writer.close()
for (eachRow in calculationData) {
rowContent = arrayOf(
eachRow.pixelNo.toString(),
eachRow.wavelength.toString(),
eachRow.invertedPixelNo.toString(),
eachRow.I0.toString(),
eachRow.I.toString(),
eachRow.absorbance.toString()
)
content.add(rowContent)
}
writer.writeAll(content) // data is adding to csv
writer.close()
// } catch (e: Exception){
// Log.e(TAG, e.toString())
// }
}
fun saveLog(folderPath: String, fileName: String, isReference: Boolean, fullString: String) {

77
app/src/main/java/com/example/hpos/domain/SickleFindResultCaluculationWithMaxImpl.kt Normal file
View File

@@ -0,0 +1,77 @@
package com.example.hpos.domain
import com.example.hpos.data.constant.Constants
import com.example.hpos.data.model.TestRightCalculationData
import com.example.hpos.data.model.TestRightResultType
class SickleFindResultCaluculationWithMaxImpl : TestRightResultCalculation{
val testRightCalculationData = TestRightCalculationData()
override fun getResults(wavelengthToAbsorbance: ArrayList<ArrayList<Double>>): TestRightCalculationData {
val startWavelengthOne =
Constants.WAVELENGTH_OF_INTEREST_ONE - Constants.RANGE_IN_RESULT_CALCULATIONS
val endWavelengthOne =
Constants.WAVELENGTH_OF_INTEREST_ONE + Constants.RANGE_IN_RESULT_CALCULATIONS + 1
var maxAbsorbanceAtOne = -999999.0
var wavelengthOfAbsorbanceOne = 0.0
val startWavelengthTwo =
Constants.WAVELENGTH_OF_INTEREST_TWO - Constants.RANGE_IN_RESULT_CALCULATIONS
val endWavelengthTwo =
Constants.WAVELENGTH_OF_INTEREST_TWO + Constants.RANGE_IN_RESULT_CALCULATIONS + 1
var maxAbsorbanceAtTwo = -999999.0
var wavelengthOfAbsorbanceTwo = 0.0
for (each in wavelengthToAbsorbance) {
if (each[0] >= startWavelengthOne && each[0] < endWavelengthOne) {
if (each[1] > maxAbsorbanceAtOne) {
maxAbsorbanceAtOne = each[1]
wavelengthOfAbsorbanceOne = each[0]
}
}
if (each[0] >= startWavelengthTwo && each[0] < endWavelengthTwo) {
// maxAbsorbanceAtTwo = max(maxAbsorbanceAtTwo, each[1])
if (each[1] > maxAbsorbanceAtTwo) {
maxAbsorbanceAtTwo = each[1]
wavelengthOfAbsorbanceTwo = each[0]
}
}
}
testRightCalculationData.absorbanceOne = maxAbsorbanceAtOne
testRightCalculationData.wavelengthOfAbsorbanceOne = wavelengthOfAbsorbanceOne
testRightCalculationData.absorbanceTwo = maxAbsorbanceAtTwo
testRightCalculationData.wavelengthOfAbsorbanceTwo = wavelengthOfAbsorbanceTwo
testRightCalculationData.result = calculateResultsAndRatio(maxAbsorbanceAtOne, maxAbsorbanceAtTwo)
return testRightCalculationData
}
private fun calculateResultsAndRatio(
absorbanceAtWaveOne: Double,
absorbanceAtWaveTwo: Double
): TestRightResultType {
if (absorbanceAtWaveOne != Double.MIN_VALUE && absorbanceAtWaveTwo != Double.MIN_VALUE && absorbanceAtWaveOne != 0.0) {
val value = absorbanceAtWaveTwo / absorbanceAtWaveOne
testRightCalculationData.ratioValue = value
if (value < 0.30 || value == 0.0) {
testRightCalculationData.ratioMinRange = 0.0
testRightCalculationData.ratioMaxRange = 0.30
return TestRightResultType.NORMAL
} else if (value >= 0.30 && value < 0.31) {
testRightCalculationData.ratioMinRange = 0.30
testRightCalculationData.ratioMaxRange = 0.31
return TestRightResultType.UNDEFINED
} else if (value >= 0.31) {
testRightCalculationData.ratioMinRange = 0.31
testRightCalculationData.ratioMaxRange = 999.0
return TestRightResultType.SICKLECELLDISEASE
}
}
return TestRightResultType.UNDEFINED
}
}

6
app/src/main/java/com/example/hpos/presentation/MainActivity.kt
View File

@@ -21,6 +21,7 @@ import androidx.lifecycle.ViewModelProvider
import com.example.hpos.R
import com.example.hpos.data.DataHolder
import com.example.hpos.data.constant.Constants
import com.example.hpos.data.model.TestType
import com.example.hpos.databinding.ActivityMainBinding
import com.example.hpos.presentation.testRight.TestRightActivity
import com.example.hpos.util.MyViewModelFactory
@@ -123,12 +124,15 @@ class MainActivity : AppCompatActivity()
private fun setupListeners() {
binding.cvItem1.setOnClickListener {
DataHolder.selectedTestType = TestType.SICKLECERT
val i = Intent(applicationContext, TestRightActivity::class.java)
startActivity(i)
}
binding.cvItem2.setOnClickListener {
Toast.makeText(this, "To be Implemented", Toast.LENGTH_SHORT).show()
DataHolder.selectedTestType = TestType.SICKLEFIND
val i = Intent(applicationContext, TestRightActivity::class.java)
startActivity(i)
}
DataHolder.usbConnected.observe(this){

2
app/src/main/java/com/example/hpos/presentation/testRight/TestRightActivity.kt
View File

@@ -119,7 +119,7 @@ class TestRightActivity : AppCompatActivity() {
onBackPressed()
return
}
DataHolder.deviceSerialNumber = mDriver.device.serialNumber.toString()
mConnection = manager.openDevice(mDriver.device)
if (mConnection == null) {

25
app/src/main/java/com/example/hpos/presentation/testRight/TestRightExpReference.kt
View File

@@ -15,6 +15,7 @@ import com.example.hpos.R
import com.example.hpos.data.DataHolder
import com.example.hpos.data.constant.Constants
import com.example.hpos.data.constant.TestRightCommands
import com.example.hpos.data.model.ErrorMessage
import com.example.hpos.databinding.FragmentTestRightExpReferenceBinding
import com.example.hpos.presentation.UsbServiceListener
import com.example.hpos.presentation.utils.MyDialogListener
@@ -75,8 +76,11 @@ class TestRightExpReference : Fragment() {
}
viewModel.errorTriggered.observe(viewLifecycleOwner) {
if (!it.isNullOrEmpty()){
UIUtils.onShowErrorToast(requireContext(), it)
if (it != null){
UIUtils.onShowErrorToast(requireContext(), it.message)
if (it.code == Constants.ERROR_CRITICAL){
activity?.onBackPressed()
}
}
}
@@ -122,6 +126,7 @@ class TestRightExpReference : Fragment() {
val stringData = String(it)
fullReadOutput.append(stringData)
Log.d(TAG, "fullReadOutput = $fullReadOutput")
if (stringData.contains("OK", true)) {
Log.d(
TAG,
@@ -133,14 +138,16 @@ class TestRightExpReference : Fragment() {
Log.d(TAG, "results = FINE")
viewModel.progressBar.postValue(false)
viewModel.errorTriggered.postValue("Please Try Again this step")
viewModel.errorTriggered.postValue(ErrorMessage("Please Try Again!!", Constants.ERROR_CRITICAL))
}
}
}
override fun onUsbError(e: Exception?) {
Log.e(TAG, "onUsbIoError() called in sendCmdToFetchDeviceConstant() -> $e")
viewModel.errorTriggered.postValue("Please Try Again this step")
viewModel.errorTriggered.postValue(ErrorMessage("Please Try Again this step", Constants.ERROR_NORMAL))
viewModel.progressBar.postValue(false)
}
})
@@ -257,12 +264,15 @@ class TestRightExpReference : Fragment() {
fullReadOutput.append(stringData)
// Log.d(TAG, stringData)
if (stringData.contains("OK", true)) {
// if (stringData.contains("OK", true)) {
// if (fullReadOutput.substring(Math.max(fullReadOutput.length - 15, 0)).contains("OK", true)) {
if (stringData.trim().isNotEmpty() && fullReadOutput.substring(Math.max(fullReadOutput.length - 15, 0)).contains("OK [0]", true)) {
Log.d(TAG, "onUsbRead() called in sendCmdToFetchLightIntensities()")
// Log.d(TAG, fullReadOutput.toString())
viewModel.mapIntensityValues(fullReadOutput.toString(), true)
viewModel.saveLogTest(requireContext().applicationContext, true, fullReadOutput.toString())
// viewModel.saveLogTest(requireContext().applicationContext, true, fullReadOutput.toString())
DataHolder.isReferenceTaken = true
@@ -278,7 +288,8 @@ class TestRightExpReference : Fragment() {
override fun onUsbError(e: Exception?) {
Log.e(TAG, "onUsbIoError() called in sendCmdToFetchLightIntensities() -> $e")
viewModel.errorTriggered.postValue("Please Try Again this step")
viewModel.errorTriggered.postValue(ErrorMessage("Please Try Again this step", Constants.ERROR_NORMAL))
viewModel.progressBar.postValue(false)
}
})

114
app/src/main/java/com/example/hpos/presentation/testRight/TestRightExpSample.kt
View File

@@ -10,10 +10,14 @@ import android.view.ViewGroup
import androidx.fragment.app.Fragment
import androidx.fragment.app.activityViewModels
import com.example.hpos.R
import com.example.hpos.data.DataHolder
import com.example.hpos.data.PreferenceUtility
import com.example.hpos.data.constant.Constants
import com.example.hpos.data.constant.TestRightCommands
import com.example.hpos.data.model.ErrorMessage
import com.example.hpos.data.model.PatientData
import com.example.hpos.data.model.TestRightResultType
import com.example.hpos.data.model.TestType
import com.example.hpos.databinding.FragmentTestRightExpSampleBinding
import com.example.hpos.presentation.UsbServiceListener
import com.example.hpos.presentation.utils.MyDialogListener
@@ -61,8 +65,11 @@ class TestRightExpSample : Fragment() {
}
viewModel.errorTriggered.observe(viewLifecycleOwner) {
if (!it.isNullOrEmpty()){
UIUtils.onShowErrorToast(requireContext(), it)
if (it != null){
UIUtils.onShowErrorToast(requireContext(), it.message)
if (it.code == Constants.ERROR_CRITICAL){
activity?.onBackPressed()
}
}
}
@@ -133,9 +140,11 @@ class TestRightExpSample : Fragment() {
data?.let {
val stringData = String(it)
fullReadOutput.append(stringData)
if (stringData.contains("OK", true)) {
// viewModel.progressBar.postValue(false)
Log.d(TAG, stringData)
// if (stringData.contains("OK", true)) {
// if (stringData.contains("OK", true) || fullReadOutput.substring(Math.max(fullReadOutput.length - 15, 0)).contains("OK", true)) {
// if (fullReadOutput.substring(Math.max(fullReadOutput.length - 15, 0)).contains("OK", true)) {
if (fullReadOutput.substring(Math.max(fullReadOutput.length - 15, 0)).contains("OK [0]", true)) {
Log.d(TAG, "onUsbRead() called in sendCmdToRun()")
Handler(Looper.getMainLooper()).postDelayed(
Runnable {
@@ -151,6 +160,8 @@ class TestRightExpSample : Fragment() {
override fun onUsbError(e: Exception?) {
Log.e(TAG, "onUsbIoError() called in sendCmdToRun() -> $e")
viewModel.errorTriggered.postValue(ErrorMessage("Please Try Again this step", Constants.ERROR_NORMAL))
viewModel.progressBar.postValue(false)
}
})
@@ -166,28 +177,70 @@ class TestRightExpSample : Fragment() {
data?.let {
val stringData = String(it)
fullReadOutput.append(stringData)
// Log.d(TAG, stringData)
if (stringData.contains("OK", true)) {
Log.d(TAG, stringData)
// if (stringData.contains("OK", true)) {
// if (stringData.contains("OK", true) || stringData.contains("O", true) || stringData.contains("K", true)) {
// if (stringData.contains("OK", true) || fullReadOutput.substring(Math.max(fullReadOutput.length - 15, 0)).contains("OK", true)) {
// if (fullReadOutput.substring(Math.max(fullReadOutput.length - 15, 0)).contains("OK", true)) {
if (stringData.trim().isNotEmpty() && fullReadOutput.substring(Math.max(fullReadOutput.length - 15, 0)).contains("OK [0]", true)) {
Log.d(TAG, "onUsbRead() called in sendCmdToFetchLightIntensities()")
viewModel.mapIntensityValues(fullReadOutput.toString(), false)
viewModel.saveLogTest(requireContext().applicationContext, false, fullReadOutput.toString())
// viewModel.saveLogTest(requireContext().applicationContext, false, fullReadOutput.toString())
// showResultsAfterAcquiring()
Handler(Looper.getMainLooper()).postDelayed(
{
checkIfToRunAgain()
},
Constants.DELAY_BETWEEN_COMMANDS
)
showResultsAfterAcquiring()
}
}
}
override fun onUsbError(e: Exception?) {
Log.e(TAG, "onUsbIoError() called in sendCmdToFetchLightIntensities() -> $e")
viewModel.errorTriggered.postValue(ErrorMessage("Please Try Again this step", Constants.ERROR_NORMAL))
viewModel.progressBar.postValue(false)
}
})
}
private fun showResultsAfterAcquiring() {
private fun checkIfToRunAgain() {
viewModel.numberOfSampleRun++
viewModel.mapWavelengthToAbsorbance()
viewModel.calculateResults()
// Todo: Save CSV + Test CSV
if (DataHolder.selectedTestType == TestType.SICKLECERT) {
viewModel.calculateResults()
} else {
viewModel.calculateResultsForSickleFind()
}
// Todo: Save Log
saveDataLocally()
if (viewModel.numberOfSampleRun < Constants.NO_OF_TIMES_TO_RUN_SAMPLE) {
Handler(Looper.getMainLooper()).postDelayed(
{
startAcquiring()
},
Constants.DELAY_BETWEEN_COMMANDS
)
} else {
viewModel.numberOfSampleRun = 0
showResultsAfterAcquiring()
}
}
private fun showResultsAfterAcquiring() {
// viewModel.mapWavelengthToAbsorbance()
// viewModel.calculateResults()
viewModel.progressBar.postValue(false)
// binding.progressBar.visibility = View.GONE
@@ -195,9 +248,40 @@ class TestRightExpSample : Fragment() {
.commit()
}
// fun View.setAllEnabled(enabled: Boolean) {
// isEnabled = enabled
// if (this is ViewGroup) children.forEach { child -> child.setAllEnabled(enabled) }
// }
private fun saveDataLocally() {
val patientName = viewModel.patientDetails.name
// if (patientName.length > 5){
// patientName = patientName.substring(0, 5)
// }
val id = PreferenceUtility.generateId(requireContext())
val prefixCsv: String = if (DataHolder.selectedTestType == TestType.SICKLECERT)
"HPOSSC_${DataHolder.deviceSerialNumber}_${patientName}_"
else
"HPOSSF_${DataHolder.deviceSerialNumber}_${patientName}_"
// val prefixCsv = "HPOSSC_${DataHolder.deviceSerialNumber}_${patientName}_"
val fileExtensionCsv = ".csv"
val fileNameCsv = prefixCsv + id + fileExtensionCsv
saveCsv(fileNameCsv)
val prefixTxt = "log_${DataHolder.deviceSerialNumber}_${patientName}_"
val fileExtensionTxt = ".txt"
val fileNameTxt = prefixTxt + id + fileExtensionTxt
saveLog(fileNameTxt)
}
private fun saveCsv(fileName: String) {
Log.d(TAG, "saveCsv() called")
viewModel.saveCsv(requireContext().applicationContext, fileName)
viewModel.saveCsvForTesting(requireContext().applicationContext, "detailed_$fileName")
}
private fun saveLog(fileName: String) {
Log.d(TAG, "saveLog() called")
viewModel.saveLogWithPatient(requireContext().applicationContext, fileName)
}
}

102
app/src/main/java/com/example/hpos/presentation/testRight/TestRightResults.kt
View File

@@ -6,12 +6,15 @@ import android.util.Log
import android.view.LayoutInflater
import android.view.View
import android.view.ViewGroup
import android.widget.Toast
import androidx.fragment.app.Fragment
import androidx.fragment.app.activityViewModels
import com.example.hpos.R
import com.example.hpos.data.DataHolder
import com.example.hpos.data.PreferenceUtility
import com.example.hpos.data.constant.Constants
import com.example.hpos.data.model.TestRightResultType
import com.example.hpos.data.model.TestType
import com.example.hpos.databinding.FragmentTestRightResultsBinding
import com.example.hpos.presentation.MainActivity
import com.example.hpos.util.MyUtils
@@ -38,8 +41,8 @@ class TestRightResults : Fragment() {
super.onViewCreated(view, savedInstanceState)
setupListeners()
updateResults()
saveCsv()
saveLog()
// saveCsv()
// saveLog()
}
private fun setupListeners() {
@@ -48,16 +51,20 @@ class TestRightResults : Fragment() {
startActivity(i)
}
binding.ivNext.setOnClickListener {
if (DataHolder.sampleReadCounter > Constants.MAXIMUM_TEST_ALLOWED_BEFORE_REFERENCE) {
DataHolder.sampleReadCounter = 0
DataHolder.isReferenceTaken = false
parentFragmentManager.beginTransaction()
.replace(R.id.fl_main, TestRightExpReference())
.commit()
} else {
parentFragmentManager.beginTransaction().replace(R.id.fl_main, TestRightExpSample())
.commit()
}
moveToSamplePage()
}
}
fun moveToSamplePage() {
if (DataHolder.sampleReadCounter > Constants.MAXIMUM_TEST_ALLOWED_BEFORE_REFERENCE) {
DataHolder.sampleReadCounter = 0
DataHolder.isReferenceTaken = false
parentFragmentManager.beginTransaction()
.replace(R.id.fl_main, TestRightExpReference())
.commit()
} else {
parentFragmentManager.beginTransaction().replace(R.id.fl_main, TestRightExpSample())
.commit()
}
}
@@ -107,8 +114,14 @@ class TestRightResults : Fragment() {
private fun saveCsv() {
Log.d(TAG, "saveCsv() called")
val sdfDate = SimpleDateFormat("ddMMyyyy HHmmss")
val fileName: String = sdfDate.format(Date()) + ".csv"
// val sdfDate = SimpleDateFormat("ddMMyyyy HHmmss")
// val fileName: String = sdfDate.format(Date()) + ".csv"
val prefix = "HPOSSC_${DataHolder.deviceSerialNumber}_"
val fileExtension = ".csv"
val fileName = PreferenceUtility.generateId(requireContext(), prefix) + fileExtension
viewModel.saveCsv(requireContext().applicationContext, fileName)
viewModel.saveCsvForTesting(requireContext().applicationContext, "testing$fileName")
@@ -121,22 +134,59 @@ class TestRightResults : Fragment() {
binding.tvGender.text =
getString(R.string.gender_in_textview, viewModel.patientDetails.gender)
// binding.tvResultValue.text = viewModel.patientDetails.results.toString()
when (viewModel.patientDetails.results) {
TestRightResultType.NORMAL -> {
binding.resultNormal.visibility = View.VISIBLE
if (DataHolder.selectedTestType == TestType.SICKLECERT){
when (viewModel.patientDetails.results) {
TestRightResultType.NORMAL -> {
binding.resultNormal.visibility = View.VISIBLE
}
TestRightResultType.SICKLECELLDISEASE -> {
binding.resultDisease.visibility = View.VISIBLE
}
TestRightResultType.SICKLECELLTRAIT -> {
binding.resultTrait.visibility = View.VISIBLE
}
else -> {
// binding.resultUndefined.visibility = View.VISIBLE
Toast.makeText(requireContext().applicationContext, "Please Test Again", Toast.LENGTH_LONG).show()
moveToSamplePage()
// val i = Intent(requireContext().applicationContext, MainActivity::class.java)
// startActivity(i)
}
}
TestRightResultType.SICKLECELLDISEASE -> {
binding.resultDisease.visibility = View.VISIBLE
}
TestRightResultType.SICKLECELLTRAIT -> {
binding.resultTrait.visibility = View.VISIBLE
}
else -> {
binding.resultUndefined.visibility = View.VISIBLE
} else {
when (viewModel.patientDetails.results) {
TestRightResultType.SICKLECELLDISEASE -> {
binding.resultDisease.visibility = View.VISIBLE
binding.resultDisease.text = "Positive"
}
TestRightResultType.NORMAL -> {
binding.resultNormal.visibility = View.VISIBLE
binding.resultNormal.text = "Negative"
}
else -> {
Toast.makeText(requireContext().applicationContext, "Please Test Again", Toast.LENGTH_LONG).show()
moveToSamplePage()
// val i = Intent(requireContext().applicationContext, MainActivity::class.java)
// startActivity(i)
}
}
}
// when (viewModel.patientDetails.results) {
// TestRightResultType.NORMAL -> {
// binding.resultNormal.visibility = View.VISIBLE
// }
// TestRightResultType.SICKLECELLDISEASE -> {
// binding.resultDisease.visibility = View.VISIBLE
// }
// TestRightResultType.SICKLECELLTRAIT -> {
// binding.resultTrait.visibility = View.VISIBLE
// }
// else -> {
// binding.resultUndefined.visibility = View.VISIBLE
// }
// }
// Log.d(TAG, "\n\n\n\nFor intensity Reference array size = ${DataHolder.intensityReferenceArray.size}")
// for (each in DataHolder.intensityReferenceArray){
// Log.d(TAG, "${each}")

196
app/src/main/java/com/example/hpos/presentation/testRight/TestRightViewModel.kt
View File

@@ -6,14 +6,8 @@ import androidx.lifecycle.MutableLiveData
import androidx.lifecycle.ViewModel
import com.example.hpos.data.DataHolder
import com.example.hpos.data.constant.Constants
import com.example.hpos.data.model.CalculationVariableForTest
import com.example.hpos.data.model.PatientData
import com.example.hpos.data.model.TestRightCalculationData
import com.example.hpos.data.model.TestRightDeviceConstants
import com.example.hpos.domain.ResultCalculationWithMaxImpl
import com.example.hpos.domain.SaveRawData
import com.example.hpos.domain.SaveRawDataTest
import com.example.hpos.domain.TestRightResultCalculation
import com.example.hpos.data.model.*
import com.example.hpos.domain.*
import com.example.hpos.util.MyUtils
import java.text.SimpleDateFormat
import java.util.*
@@ -28,7 +22,10 @@ class TestRightViewModel : ViewModel() {
var isServiceConnected = false
val progressBar = MutableLiveData(false)
val errorTriggered = MutableLiveData<String>("")
// val errorTriggered = MutableLiveData<String>("")
val errorTriggered = MutableLiveData<ErrorMessage>()
var numberOfSampleRun = 0
lateinit var patientDetails: PatientData
@@ -43,8 +40,8 @@ class TestRightViewModel : ViewModel() {
val calculationVariableList = ArrayList<CalculationVariableForTest>()
fun mapDeviceConstants(string: String) {
Log.d(TAG, "mapDeviceConstants() called")
// viewModelScope.launch {
// Log.d(TAG, "mapDeviceConstants() called")
// Log.d(TAG, "mapDeviceConstants() value -> $string")
if (string.isNotEmpty()) {
val listOfStrings = string.split(",")
if (listOfStrings.size >= 4) {
@@ -59,12 +56,22 @@ class TestRightViewModel : ViewModel() {
} else {
// Todo: Throws error
// "Error 201: In processing the data from device"
errorTriggered.postValue("Error 201: In processing the data from device")
errorTriggered.postValue(
ErrorMessage(
"Error 201: In processing the data from device",
Constants.ERROR_NORMAL
)
)
}
} else {
// Todo: Throws error (showing error if empty by using a mutable error string)
// "Error 202: Unable to fetch data from device."
errorTriggered.postValue("Error 202: Unable to fetch data from device.")
errorTriggered.postValue(
ErrorMessage(
"Error 202: Unable to fetch data from device.",
Constants.ERROR_NORMAL
)
)
}
// }
}
@@ -88,7 +95,13 @@ class TestRightViewModel : ViewModel() {
} else {
// Todo: Throws error
// "Error 203: Unable to fetch data from device."
errorTriggered.postValue("Error 203: Unable to fetch data from device.")
errorTriggered.postValue(
ErrorMessage(
"Error 203: Unable to fetch data from device.",
Constants.ERROR_NORMAL
)
)
}
// }
}
@@ -98,7 +111,7 @@ class TestRightViewModel : ViewModel() {
if (isReference) DataHolder.intensityReferenceArray.clear()
else intensitySampleArray.clear()
Log.d(TAG, fullString)
Log.d("SURYAKUMAR", fullString)
val listOfString = fullString.split("\n")
for (line in listOfString) {
@@ -114,7 +127,13 @@ class TestRightViewModel : ViewModel() {
intensitySampleArray.add(numbers[1].toDouble())
} else {
// "Error 204: Unable to fetch data from device."
errorTriggered.postValue("Error 204: Unable to fetch data from device.")
errorTriggered.postValue(
ErrorMessage(
"Error 204: Unable to fetch data from device.",
Constants.ERROR_NORMAL
)
)
}
}
}
@@ -152,7 +171,13 @@ class TestRightViewModel : ViewModel() {
fun mapWavelengthToAbsorbance() {
if (DataHolder.intensityReferenceArray.size != intensitySampleArray.size || DataHolder.wavelengthToPixelArray.size != intensitySampleArray.size || DataHolder.wavelengthToPixelArray.size != DataHolder.intensityReferenceArray.size) {
errorTriggered.postValue("Error 205: Unable to fetch data from device, please try again by reopening the app")
errorTriggered.postValue(
ErrorMessage(
"Error 205: Unable to fetch data from device, please try again by reopening the app",
Constants.ERROR_CRITICAL
)
)
throw Exception("Inconsistency in the data, size of arrays are not same. \nintensityReferenceArray.size = ${DataHolder.intensityReferenceArray.size} ; intensitySampleArray.size = ${intensitySampleArray.size} ; wavelengthToPixelArray.size = ${DataHolder.wavelengthToPixelArray.size}")
}
@@ -196,7 +221,8 @@ class TestRightViewModel : ViewModel() {
// Todo: Remove
val calculationVariableForTest = CalculationVariableForTest()
calculationVariableForTest.pixelNo = index + 1
calculationVariableForTest.invertedPixelNo = invertedPixelIndex+1 // 0-based indexing
calculationVariableForTest.invertedPixelNo =
invertedPixelIndex + 1 // 0-based indexing
calculationVariableForTest.wavelength = wavelength
calculationVariableForTest.I0 = i0
calculationVariableForTest.I = i1
@@ -218,53 +244,125 @@ class TestRightViewModel : ViewModel() {
}
fun calculateResultsForSickleFind() {
DataHolder.sampleReadCounter++
val resultCalculation: TestRightResultCalculation =
SickleFindResultCaluculationWithMaxImpl()
calculationData = resultCalculation.getResults(wavelengthToAbsorbance)
patientDetails.results = calculationData.result
}
fun saveCsv(appContext: Context, filename: String) {
var folderPath: String? = DataHolder.appFolderPath
if (DataHolder.isAppFolderCreated) {
SaveRawData().saveCsv(folderPath!!, filename, wavelengthToAbsorbance)
} else {
folderPath = MyUtils.createAppFolder(appContext)
if (folderPath != null){
DataHolder.isAppFolderCreated = true
DataHolder.appFolderPath = folderPath
SaveRawData().saveCsv(folderPath, filename, wavelengthToAbsorbance)
// try {
var folderPath: String? = DataHolder.appFolderPath
if (DataHolder.isAppFolderCreated) {
SaveRawData().saveCsv(folderPath!!, filename, wavelengthToAbsorbance)
} else {
folderPath = MyUtils.createAppFolder(appContext)
if (folderPath != null) {
DataHolder.isAppFolderCreated = true
DataHolder.appFolderPath = folderPath
SaveRawData().saveCsv(folderPath, filename, wavelengthToAbsorbance)
} else {
// errorTriggered.postValue("Unable to save CSV, Please try again")
}
}
}
// } catch (e: java.io.FileNotFoundException) {
// errorTriggered.postValue(
// ErrorMessage(
// "File name isn't valid",
// Constants.ERROR_CRITICAL
// )
// )
// }
}
fun saveCsvForTesting(appContext: Context, filename: String) {
var folderPath: String? = DataHolder.appFolderPath
if (DataHolder.isAppFolderCreated) {
SaveRawDataTest().saveCsv(folderPath!!, filename, calculationVariableList)
} else {
folderPath = MyUtils.createAppFolder(appContext)
if (folderPath != null){
DataHolder.isAppFolderCreated = true
DataHolder.appFolderPath = folderPath
SaveRawDataTest().saveCsv(folderPath, filename, calculationVariableList)
// try {
var folderPath: String? = DataHolder.appFolderPath
if (DataHolder.isAppFolderCreated) {
SaveRawDataTest().saveCsv(folderPath!!, filename, calculationVariableList)
} else {
folderPath = MyUtils.createAppFolder(appContext)
if (folderPath != null) {
DataHolder.isAppFolderCreated = true
DataHolder.appFolderPath = folderPath
SaveRawDataTest().saveCsv(folderPath, filename, calculationVariableList)
} else {
// errorTriggered.postValue("Unable to save CSV, Please try again")
}
}
}
// } catch (e: java.io.FileNotFoundException) {
// errorTriggered.postValue(
// ErrorMessage(
// "File name isn't valid",
// Constants.ERROR_CRITICAL
// )
// )
// }
}
fun saveLog(appContext: Context, fileName: String) {
var folderPath: String? = DataHolder.appFolderPath
// try {
var folderPath: String? = DataHolder.appFolderPath
if (DataHolder.isAppFolderCreated) {
SaveRawData().saveLog(folderPath!!, fileName, calculationData)
} else {
folderPath = MyUtils.createAppFolder(appContext)
if (folderPath != null){
DataHolder.isAppFolderCreated = true
DataHolder.appFolderPath = folderPath
SaveRawData().saveLog(folderPath, fileName, calculationData)
if (DataHolder.isAppFolderCreated) {
SaveRawData().saveLog(folderPath!!, fileName, calculationData)
} else {
folderPath = MyUtils.createAppFolder(appContext)
if (folderPath != null) {
DataHolder.isAppFolderCreated = true
DataHolder.appFolderPath = folderPath
SaveRawData().saveLog(folderPath, fileName, calculationData)
} else {
// errorTriggered.postValue("Unable to save Log, Please try again")
}
}
}
// } catch (e: java.io.FileNotFoundException) {
// errorTriggered.postValue(
// ErrorMessage(
// "File name isn't valid",
// Constants.ERROR_CRITICAL
// )
// )
// }
}
fun saveLogWithPatient(appContext: Context, fileName: String) {
// try {
var folderPath: String? = DataHolder.appFolderPath
if (DataHolder.isAppFolderCreated) {
SaveRawData().saveLogWithPatientData(
folderPath!!,
fileName,
calculationData,
patientDetails
)
} else {
folderPath = MyUtils.createAppFolder(appContext)
if (folderPath != null) {
DataHolder.isAppFolderCreated = true
DataHolder.appFolderPath = folderPath
SaveRawData().saveLogWithPatientData(
folderPath,
fileName,
calculationData,
patientDetails
)
} else {
// errorTriggered.postValue("Unable to save Log, Please try again")
}
}
// } catch (e: java.io.FileNotFoundException) {
// errorTriggered.postValue(
// ErrorMessage(
// "File name isn't valid",
// Constants.ERROR_CRITICAL
// )
// )
// }
}
fun saveLogTest(appContext: Context, isReference: Boolean, fullString: String) {
@@ -281,7 +379,7 @@ class TestRightViewModel : ViewModel() {
SaveRawDataTest().saveLog(folderPath!!, fileName, isReference, fullString)
} else {
folderPath = MyUtils.createAppFolder(appContext)
if (folderPath != null){
if (folderPath != null) {
DataHolder.isAppFolderCreated = true
DataHolder.appFolderPath = folderPath
SaveRawDataTest().saveLog(folderPath, fileName, isReference, fullString)

44
app/src/main/res/layout/activity_test_right.xml
View File

@@ -10,30 +10,30 @@
android:layout_width="match_parent"
android:layout_height="match_parent">
<androidx.appcompat.widget.Toolbar
android:id="@+id/my_toolbar"
android:layout_width="match_parent"
android:layout_height="?attr/actionBarSize"
android:background="?attr/colorPrimary"
app:titleTextColor="#FFFFFF"
android:elevation="4dp"
app:menu="@menu/my_menu"
android:theme="@style/ToolbarTheme"
app:popupTheme="@style/ThemeOverlay.AppCompat.Light"
app:layout_constraintStart_toStartOf="parent"
app:layout_constraintTop_toTopOf="parent"/>
<androidx.appcompat.widget.Toolbar
android:id="@+id/my_toolbar"
android:layout_width="match_parent"
android:layout_height="?attr/actionBarSize"
android:background="?attr/colorPrimary"
app:titleTextColor="#FFFFFF"
android:elevation="4dp"
app:menu="@menu/my_menu"
android:theme="@style/ToolbarTheme"
app:popupTheme="@style/ThemeOverlay.AppCompat.Light"
app:layout_constraintStart_toStartOf="parent"
app:layout_constraintTop_toTopOf="parent"/>
<FrameLayout
android:id="@+id/fl_main"
android:layout_width="match_parent"
android:layout_height="0dp"
app:layout_constraintStart_toStartOf="parent"
app:layout_constraintEnd_toEndOf="parent"
app:layout_constraintTop_toBottomOf="@id/my_toolbar"
app:layout_constraintBottom_toBottomOf="parent"
tools:context=".presentation.testRight.TestRightActivity">
<FrameLayout
android:id="@+id/fl_main"
android:layout_width="match_parent"
android:layout_height="0dp"
app:layout_constraintStart_toStartOf="parent"
app:layout_constraintEnd_toEndOf="parent"
app:layout_constraintTop_toBottomOf="@id/my_toolbar"
app:layout_constraintBottom_toBottomOf="parent"
tools:context=".presentation.testRight.TestRightActivity">
</FrameLayout>
</FrameLayout>
</androidx.constraintlayout.widget.ConstraintLayout>

96
app/src/test/java/com/example/hpos/CubicEquationSolver.kt Normal file
View File

@@ -0,0 +1,96 @@
package com.example.hpos
import org.junit.Test
class CubicEquationSolver {
@Test
fun test() {
val a: Double = 12.toDouble()
val b: Double = (15).toDouble()
val c: Double = (9).toDouble()
val d: Double = (-2456).toDouble()
solve(a, b, c, d)
}
fun solve(a: Double, b: Double, c: Double, d: Double) {
val f: Double = getF(a, b, c)
val g: Double = getG(a, b, c, d)
val h: Double = getH(f, g)
println("f = $f & g = $g & h = $h")
if (f == 0.0 && g == 0.0 && h == 0.0)
solveOneRoot(a, d)
else if (h <= 0)
solveRealRoots(a, b, g, h)
else
solveNotRealRoots(a, b, g, h)
}
private fun getF(a: Double, b: Double, c: Double): Double {
return (3 * c / a - b * b / (a * a)) / 3
}
private fun getG(a: Double, b: Double, c: Double, d: Double): Double {
var g: Double = 2 * b * b * b / (a * a * a)
g += -9 * b * c / (a * a)
g += 27 * d / a
g /= 27.0
return g
}
private fun getH(f: Double, g: Double): Double {
return g * g / 4 + f * f * f / 27
}
private fun solveOneRoot(a: Double, d: Double) {
val x: Double = -Math.pow(d / a, 1.0 / 3)
println("The solution is: $x")
println("rounded off solutions are:")
println(String.format("%.3g%n", x))
}
private fun solveRealRoots(a: Double, b: Double, g: Double, h: Double) {
val i: Double = Math.sqrt(g * g / 4 - h)
val j: Double = Math.pow(i, 1.0 / 3)
val k: Double = Math.acos(-g / (2 * i))
val l: Double = -j
val m: Double = Math.cos(k / 3)
val n: Double = Math.sqrt(3.0) * Math.sin(k / 3)
val p: Double = -b / (3 * a)
val x1: Double = 2 * j * Math.cos(k / 3) - b / (3 * a)
val x2: Double = l * (m + n) + p
val x3: Double = l * (m - n) + p
println("The solutions are:")
println(x1)
println(x2)
println(x3)
println("rounded off solutions are:")
println(String.format("%.3g", x1))
println(String.format("%.3g", x2))
println(String.format("%.3g", x3))
}
private fun solveNotRealRoots(a: Double, b: Double, g: Double, h: Double) {
val r: Double = -(g / 2) + Math.sqrt(h)
val s: Double = if (r >= 0) Math.pow(r, 1.0 / 3) else -Math.pow(-r, 1.0 / 3)
val t: Double = -(g / 2) - Math.sqrt(h)
val u: Double = if (t >= 0) Math.pow(t, 1.0 / 3) else -Math.pow(-t, 1.0 / 3)
val x1: Double = s + u - b / (3 * a)
val x2: Double = -((s + u) / 2) - b / (3 * a)
val immaginary: Double = (s - u) * Math.sqrt(3.0) / 2
println("The solutions are:")
println(x1)
println(x2.toString() + " + " + immaginary + "i")
println(x2.toString() + " - " + immaginary + "i")
}
}

2
app/src/test/java/com/example/hpos/InputData.kt
View File

@@ -1,7 +1,7 @@
package com.example.hpos
class InputData {
val inputRead = "0,1.69989422e-06,1.60642711e-01, 3.85754470e+02,0,0,1,0, FFF-EEEE-PPP-WW-YY-NNNN\nОК [01]"
val inputRead = "0,1.69989422e-06,1.60642711e-01,3.85754470e+02,0,0,1,0,FFF-EEEE-PPPP-WW-YY-NNNN\nOK [0]"
val printForReference: String = """
Buf 1 : 31

15
app/src/test/java/com/example/hpos/OtherTests.kt Normal file
View File

@@ -0,0 +1,15 @@
package com.example.hpos
import org.junit.Test
import java.util.*
import java.util.concurrent.atomic.AtomicLong
class OtherTests {
@Test
fun uniqueId() {
val date = Date()
date.day
}
}

60
app/src/test/java/com/example/hpos/TestDataGenerator.kt Normal file
View File

@@ -0,0 +1,60 @@
package com.example.hpos
import org.junit.Test
import java.io.File
import java.io.InputStream
import java.util.*
import kotlin.collections.ArrayList
class TestDataGenerator {
fun getOutputMapPixelNumberToWavelength() : ArrayList<Double> {
val path = "/Users/vsuryakumar/SMInnovations/AndroidProjects/refactoredapp/app/src/test/java/com/example/hpos"
val fileName = "mapPixelNumberToWavelength_output.txt"
val file = File("$path/$fileName")
val text = file.readText()
val pixelList = ArrayList<Double>()
for (each in text.split('\n')){
pixelList.add(each.toDouble())
}
return pixelList
}
fun getOutputMapWavelengthToAbsorbance(): ArrayList<Double> {
val path = "/Users/vsuryakumar/SMInnovations/AndroidProjects/refactoredapp/app/src/test/java/com/example/hpos"
val fileName = "getOutputMapWavelengthToAbsorbance_output.txt"
val file = File("$path/$fileName")
val text = file.readText()
val pixelList = ArrayList<Double>()
for (each in text.split('\n')){
pixelList.add(each.toDouble())
}
return pixelList
}
fun getInputReferenceMapIntensityValues(): String {
val path = "/Users/vsuryakumar/SMInnovations/AndroidProjects/refactoredapp/app/src/test/java/com/example/hpos"
val fileName = "getInputReferenceMapIntensityValues_input.txt"
val file = File("$path/$fileName")
return file.readText()
}
fun getInputSampleMapIntensityValues(): String {
val path = "/Users/vsuryakumar/SMInnovations/AndroidProjects/refactoredapp/app/src/test/java/com/example/hpos"
val fileName = "getInputSampleMapIntensityValues_input.txt"
val file = File("$path/$fileName")
return file.readText()
}
// fun getOutputReferenceMapIntensityValues(): ArrayList<Double> {
//
// }
//
// fun getOutputSampleMapIntensityValues(): ArrayList<Double> {
//
// }
}

62
app/src/test/java/com/example/hpos/TestRightViewModelTest.kt
View File

@@ -1,19 +1,21 @@
package com.example.hpos
import com.example.hpos.data.constant.Constants
import com.example.hpos.data.DataHolder
import com.example.hpos.data.constant.Constants
import com.example.hpos.data.model.PatientData
import com.example.hpos.data.model.TestRightResultType
import com.example.hpos.presentation.testRight.TestRightViewModel
import junit.framework.Assert.assertEquals
import org.junit.Test
import java.math.RoundingMode
import java.text.DecimalFormat
class TestRightViewModelTest {
private val viewModel = TestRightViewModel()
private val data = InputData()
@Test
fun testRightViewModel_mapDeviceConstants() {
fun test_mapDeviceConstants() {
viewModel.mapDeviceConstants(data.inputRead)
assertEquals("0", DataHolder.deviceConstant!!.a)
assertEquals("1.69989422e-06", DataHolder.deviceConstant!!.b)
@@ -22,31 +24,60 @@ class TestRightViewModelTest {
}
@Test
fun testRightViewModel_mapPixelNumberToWavelength() {
fun test_mapPixelNumberToWavelength() {
viewModel.mapDeviceConstants(data.inputRead)
viewModel.mapPixelNumberToWavelength()
var i = 1
for (each in DataHolder.wavelengthToPixelArray){
System.out.print(i)
System.out.print(" -> ")
System.out.println(each)
i++
}
val outputList = TestDataGenerator().getOutputMapPixelNumberToWavelength()
assertEquals(Constants.TEST_RIGHT_TOTAL_PIXEL, DataHolder.wavelengthToPixelArray.size)
assertEquals(Constants.TEST_RIGHT_TOTAL_PIXEL, outputList.size)
val df = DecimalFormat("#.###")
df.roundingMode = RoundingMode.FLOOR
for (i in 0 until Constants.TEST_RIGHT_TOTAL_PIXEL){
assertEquals(df.format(outputList[i]), df.format(DataHolder.wavelengthToPixelArray[i]))
}
}
// @Test
// fun test_mapIntensityValues() {
// val inputReference = TestDataGenerator().getInputReferenceMapIntensityValues()
// val inputSample = TestDataGenerator().getInputSampleMapIntensityValues()
//
// viewModel.mapIntensityValues(inputReference, true)
// viewModel.mapIntensityValues(inputSample, false)
//
// val outputReference = TestDataGenerator().getOutputReferenceMapIntensityValues()
// val outputSample = TestDataGenerator().getOutputSampleMapIntensityValues()
//
// assertEquals(outputReference, DataHolder.intensityReferenceArray)
// assertEquals(outputSample, viewModel.intensitySampleArray)
// }
@Test
fun testRightViewModel_calculateResults() {
fun test_mapWavelengthToAbsorbance() {
viewModel.mapDeviceConstants(data.inputRead)
viewModel.mapPixelNumberToWavelength()
viewModel.mapIntensityValues(data.printForReference, true)
viewModel.mapIntensityValues(data.printForSample, false)
viewModel.mapIntensityValues(TestDataGenerator().getInputReferenceMapIntensityValues(), true)
viewModel.mapIntensityValues(TestDataGenerator().getInputSampleMapIntensityValues(), false)
viewModel.patientDetails = PatientData("Surya", 2, "Male", TestRightResultType.UNDEFINED)
viewModel.calculateResults()
viewModel.mapWavelengthToAbsorbance()
val wavelengthList = TestDataGenerator().getOutputMapPixelNumberToWavelength()
val absorbanceList = TestDataGenerator().getOutputMapWavelengthToAbsorbance()
val df = DecimalFormat("#.###")
df.roundingMode = RoundingMode.FLOOR
assertEquals(Constants.TEST_RIGHT_TOTAL_PIXEL, viewModel.wavelengthToAbsorbance.size)
for (i in 0 until Constants.TEST_RIGHT_TOTAL_PIXEL){
assertEquals(df.format(wavelengthList[i]), df.format(viewModel.wavelengthToAbsorbance[i][0]))
assertEquals(df.format(absorbanceList[i]), df.format(viewModel.wavelengthToAbsorbance[i][1]))
}
}
@@ -67,7 +98,4 @@ class TestRightViewModelTest {
}
}

3695
app/src/test/java/com/example/hpos/getInputReferenceMapIntensityValues_input.txt Normal file
View File

File diff suppressed because it is too large Load Diff

3695
app/src/test/java/com/example/hpos/getInputSampleMapIntensityValues_input.txt Normal file
View File

File diff suppressed because it is too large Load Diff

3694
app/src/test/java/com/example/hpos/getOutputMapWavelengthToAbsorbance_output.txt Normal file
View File

File diff suppressed because it is too large Load Diff

3694
app/src/test/java/com/example/hpos/mapPixelNumberToWavelength_output.txt Normal file
View File

File diff suppressed because it is too large Load Diff