refactoring hemocube fragment and add tests

This commit is contained in:
Pritimay Sarkar
2024-01-23 13:42:27 +05:30
parent a0fc7f7be4
commit f83823a15f
6 changed files with 210 additions and 75 deletions

View File

@@ -108,6 +108,8 @@ dependencies {
testImplementation 'org.mockito:mockito-core:3.12.4'
androidTestImplementation 'org.mockito:mockito-android:3.12.4'
androidTestImplementation 'org.mockito:mockito-inline:3.12.4'
androidTestImplementation 'org.mockito:mockito-android:3.12.4'
testImplementation "androidx.arch.core:core-testing:2.2.0"
testImplementation 'org.jetbrains.kotlinx:kotlinx-coroutines-test:1.7.1'

View File

@@ -25,12 +25,10 @@ import com.example.hpostesting.presentation.utils.MyDialogListener
import com.example.hpostesting.presentation.utils.UIUtils
import com.google.firebase.crashlytics.ktx.crashlytics
import com.google.firebase.ktx.Firebase
import com.google.firebase.perf.ktx.performance
import `in`.sminnovations.hpostesting.R
import `in`.sminnovations.hpostesting.databinding.FragmentHemoCubeReferenceBinding
import kotlin.math.abs
import kotlin.math.log10
import kotlin.math.round
@Suppress("MemberVisibilityCanBePrivate")
class HemoCubeFragment : Fragment() {
@@ -44,7 +42,6 @@ class HemoCubeFragment : Fragment() {
private var resultData: String = ""
private var currentResultData: String = ""
private var isUsingExistingBuffer = false
private var loginId: String = ""
private var isTestOngoing = false
private var startListening = MutableLiveData<Boolean>(false)
private var led1BufferForDevice = 0.0
@@ -59,7 +56,7 @@ class HemoCubeFragment : Fragment() {
private var fittedAbs2 = 0.0
private var fittedAbs3 = 0.0
private var fittedAbs4 = 0.0
private var _predictedDenovixRatio = 0.0
private var calculatedPredictedDenovixRatio = 0.0
private var validationError = false
private var deviceHardwareId = ""
private var allErrorMessages = ""
@@ -211,9 +208,9 @@ class HemoCubeFragment : Fragment() {
apply {
DataHolder.hemoCubeTestData?.let {
currentDeviceData?.coefficients?.let { coefficients ->
val coefficient1 = coefficients[0]
val coefficient2 = coefficients[1]
val result = coefficient1 * coefficient2
// val coefficient1 = coefficients[0]
// val coefficient2 = coefficients[1]
// val result = coefficient1 * coefficient2
}
}
isOnline = isNetworkAvailable
@@ -394,7 +391,7 @@ class HemoCubeFragment : Fragment() {
}
}
resultData.contains("#SS") && this.testStatusCode < TestStatus.SAMPLE_STARTED.code -> {
(resultData.contains("#SS") || resultData.contains("#SS1")) && this.testStatusCode < TestStatus.SAMPLE_STARTED.code -> {
this.testStatusCode = TestStatus.SAMPLE_STARTED.code
activity?.runOnUiThread {
binding.tvSubtitle4.text = getString(R.string.sample_started)
@@ -402,7 +399,7 @@ class HemoCubeFragment : Fragment() {
}
}
resultData.contains("#SC") && this.testStatusCode < TestStatus.SAMPLE_COMPLETED.code -> {
(resultData.contains("#SC") || resultData.contains("#SC1")) && this.testStatusCode < TestStatus.SAMPLE_COMPLETED.code -> {
this.testStatusCode = TestStatus.SAMPLE_COMPLETED.code
hemoCubeViewModel.messages.postValue(
getString(R.string.sample_completed) + "\n" + getString(R.string.gathering_data))
@@ -574,7 +571,7 @@ class HemoCubeFragment : Fragment() {
}
fun processHardwareId(resultData: String) {
val hardwareId = "HCV-000-3001" //extractMiddleString(resultData)
val hardwareId = extractMiddleString(resultData)
if (!hardwareId.isNullOrBlank()) {
updateDeviceId(hardwareId)
@@ -582,17 +579,17 @@ class HemoCubeFragment : Fragment() {
binding.btnPlacebuffer.visibility = View.VISIBLE
}
hemoCubeViewModel.messages.postValue(getString(R.string.start))
if (!Constants.DEVICE_CONFIGURATION.containsKey(deviceHardwareId)) {
deviceHardwareId = "HCV-000-3001"
allErrorMessages += "Calibration configuration for this device id is not found\n"
}
if (!Constants.BUFFER_INTENSITY_THRESHOLDS.containsKey(deviceHardwareId)) {
allErrorMessages += "ADC thresholds for this device id are not found\n"
}
} else {
hemoCubeViewModel.messages.postValue("Config error")
}
if (!Constants.DEVICE_CONFIGURATION.containsKey(deviceHardwareId)) {
deviceHardwareId = "HCV-000-3001"
allErrorMessages += "Calibration configuration for this device id is not found\n"
}
if (!Constants.BUFFER_INTENSITY_THRESHOLDS.containsKey(deviceHardwareId)) {
allErrorMessages += "ADC thresholds for this device id are not found\n"
}
}
fun extractMiddleString(input: String): String? {
@@ -696,25 +693,25 @@ class HemoCubeFragment : Fragment() {
val slope1 = Constants.DEVICE_HB_PARAMETERS[deviceHardwareId]?.get(1)?.get(0)
val intercept1 = Constants.DEVICE_HB_PARAMETERS[deviceHardwareId]?.get(1)?.get(1)
val _hb1 = (led3Average - intercept1!!) / slope1!!
val calculatedHb1 = (led1Average - intercept1!!) / slope1!!
val slope2 = Constants.DEVICE_HB_PARAMETERS[deviceHardwareId]?.get(3)?.get(0)
val intercept = Constants.DEVICE_HB_PARAMETERS[deviceHardwareId]?.get(3)?.get(1)
val _hb2 = (led4Average - intercept!!) / slope2!!
val calculatedHb2 = (led2Average - intercept!!) / slope2!!
val slope3 = Constants.DEVICE_HB_PARAMETERS[deviceHardwareId]?.get(2)?.get(0)
val intercept3 = Constants.DEVICE_HB_PARAMETERS[deviceHardwareId]?.get(2)?.get(1)
val _hb3 = (led3Average - intercept3!!) / slope3!!
val calculatedHb3 = (led3Average - intercept3!!) / slope3!!
val slope4 = Constants.DEVICE_HB_PARAMETERS[deviceHardwareId]?.get(3)?.get(0)
val intercept4 = Constants.DEVICE_HB_PARAMETERS[deviceHardwareId]?.get(3)?.get(1)
val _hb4 = (led4Average - intercept4!!) / slope4!!
val calculatedHb4 = (led4Average - intercept4!!) / slope4!!
_predictedDenovixRatio = fittedAbs3.div(fittedAbs1)
calculatedPredictedDenovixRatio = fittedAbs3.div(fittedAbs1)
val slope = (led1Average - led2Average) / (435 - 415)
val _slopeRatio = abs(led3Average / slope)
val slopeClass = slopeRatioClassification(_slopeRatio)
val calculatedSlopeRatio = abs(led3Average / slope)
val slopeClass = slopeRatioClassification(calculatedSlopeRatio)
if (fittedAbs1 <= fittedAbs2) {
validationError = true
@@ -733,7 +730,7 @@ class HemoCubeFragment : Fragment() {
}
}
if ((led1Average < 0.7 || led2Average < 0.7 || led3Average < 0.7 || led4Average < 0.7) && _slopeRatio > 35.0) {
if ((led1Average < 0.7 || led2Average < 0.7 || led3Average < 0.7 || led4Average < 0.7) && calculatedSlopeRatio > 35.0) {
validationError = true
activity?.runOnUiThread {
binding.errorMessage.text = "Severely Low Hb. Repeat test with 12 ul in 2 ml Buffer"
@@ -769,12 +766,12 @@ class HemoCubeFragment : Fragment() {
this.abs2 = fittedAbs2
this.abs3 = fittedAbs3
this.abs4 = fittedAbs4
this.hb3 = _hb3
this.hb4 = _hb4
this.hb3 = calculatedHb3
this.hb4 = calculatedHb4
this.deviceRatio = deviceRatio
this.calculatedRatio = calculateRatio(deviceRatio)
this.predictedDenovixRatio = _predictedDenovixRatio
this.slopeRatio = _slopeRatio
this.predictedDenovixRatio = calculatedPredictedDenovixRatio
this.slopeRatio = calculatedSlopeRatio
this.coefficients = currentDeviceData?.coefficients?.get(0)
.toString() + ", " + currentDeviceData?.coefficients?.get(1).toString()
this.prdClassification = absorbanceBasedClassification(predictedDenovixRatio)
@@ -783,7 +780,7 @@ class HemoCubeFragment : Fragment() {
this.classificationResult = deviceRatioClass //findResult(calculatedRatio)
hemoCubeViewModel.messages.postValue("${this.deviceRatioClass} ${if (led4Average < 0.17) " - Low Hb" else ""}\n")
if (DataHolder.hemoCubeTestData?.testType == "HB")
hemoCubeViewModel.messages.postValue("HB: $_hb4")
hemoCubeViewModel.messages.postValue("HB: $calculatedHb4")
this.errorMessages = allErrorMessages
this.resultData = deviceLog
this.batteryLevel = hemoCubeViewModel.getBatteryLevel().toString()

View File

@@ -1,27 +1,20 @@
package com.example.hpostesting
import android.content.Context
import android.os.Build
import androidx.arch.core.executor.testing.InstantTaskExecutorRule
import androidx.lifecycle.Observer
import androidx.work.Configuration
import androidx.work.testing.SynchronousExecutor
import androidx.work.testing.WorkManagerTestInitHelper
import com.example.hpostesting.data.Result
import com.example.hpostesting.data.model.login.LoginResponse
import com.example.hpostesting.data.repository.Repository
import com.example.hpostesting.domain.LogFileManager
import com.example.hpostesting.presentation.hemocube.HemoCubeViewModel
import com.example.hpostesting.util.TestCoroutineRule
import io.mockk.MockKAnnotations
import io.mockk.coEvery
import io.mockk.coVerify
import io.mockk.every
import io.mockk.impl.annotations.MockK
import io.mockk.mockk
import io.mockk.verify
import junit.framework.TestCase
import kotlinx.coroutines.ExperimentalCoroutinesApi
import kotlinx.coroutines.test.runBlockingTest
import org.junit.After
import org.junit.Before
import org.junit.Rule
@@ -29,35 +22,34 @@ import org.junit.Test
import org.junit.runner.RunWith
import org.robolectric.RobolectricTestRunner
import org.robolectric.annotation.Config
import java.io.File
//@RunWith(RobolectricTestRunner::class)
//@Config(manifest = Config.NONE)
//@ExperimentalCoroutinesApi
//class HemocubeViewModelTest {
//
// @get:Rule
// val instantTaskExecutorRule = InstantTaskExecutorRule()
//
// @get:Rule
// val coroutineRule = TestCoroutineRule()
//
// @MockK(relaxed = true)
// lateinit var repository: Repository
//
// @MockK(relaxed = true)
// lateinit var logFileManager: LogFileManager
//
// @MockK(relaxed = true)
// lateinit var context: Context
//
// @MockK(relaxed = true)
// lateinit var observer: Observer<Result<LoginResponse>>
//
// private lateinit var viewModel: HemoCubeViewModel
//
// @Before
// fun setup() {
@RunWith(RobolectricTestRunner::class)
@Config(manifest = Config.NONE)
@ExperimentalCoroutinesApi
class HemocubeViewModelTest {
@get:Rule
val instantTaskExecutorRule = InstantTaskExecutorRule()
@get:Rule
val coroutineRule = TestCoroutineRule()
@MockK(relaxed = true)
lateinit var repository: Repository
@MockK(relaxed = true)
lateinit var logFileManager: LogFileManager
@MockK(relaxed = true)
lateinit var context: Context
@MockK(relaxed = true)
lateinit var observer: Observer<Result<LoginResponse>>
private lateinit var viewModel: HemoCubeViewModel
@Before
fun setup() {
// MockKAnnotations.init(this)
//
// val config = Configuration.Builder()
@@ -78,13 +70,34 @@ import java.io.File
// context
// )
// viewModel.loginResponse.observeForever(observer)
// }
//
// @After
// fun teardown() {
}
@After
fun teardown() {
// viewModel.loginResponse.removeObserver(observer)
// }
//
}
@Test
fun `testAddNumbers in HemocubeViewModelTest`() {
// Create a mock of the Calculator class using Mockito-Kotlin
val calculatorMock = mockk<Calculator>()
// Define the behavior of the add method on the mock
every { calculatorMock.add(2, 3) } returns 5
// Create an instance of MathApplication with the mock Calculator
val mathApplication = MathApplication(calculatorMock)
// Perform the test using the MathApplication
val result = mathApplication.addNumbers(2, 3)
// Verify that the add method of the mock was called with the correct parameters
verify { calculatorMock.add(2, 3) }
// Verify the result of the test
TestCase.assertEquals(5, result)
}
// @Test
// fun `login() should update LiveData with success`() = coroutineRule.runBlockingTest {
//
@@ -124,7 +137,7 @@ import java.io.File
// viewModel.uploadLogs()
//
// // Assert
// verify { observer.onChanged(response) }
// verify { observer.onChanged(response as Result<LoginResponse>) }
// }
//
// @Test
@@ -141,4 +154,4 @@ import java.io.File
// // Assert
// verify { observer.onChanged(response) }
// }
//}
}

View File

@@ -0,0 +1,15 @@
package com.example.hpostesting
class Calculator {
fun add(a: Int, b: Int): Int {
return a + b
}
}
class MathApplication(private val calculator: Calculator) {
fun addNumbers(a: Int, b: Int): Int {
return calculator.add(a, b)
}
}

View File

@@ -0,0 +1,31 @@
package com.example.hpostesting
import io.mockk.every
import io.mockk.mockk
import io.mockk.verify
import junit.framework.TestCase.assertEquals
import org.junit.Test
class MathApplicationTest {
@Test
fun testAddNumbers() {
// Create a mock of the Calculator class using Mockito-Kotlin
val calculatorMock = mockk<Calculator>()
// Define the behavior of the add method on the mock
every { calculatorMock.add(2, 3) } returns 5
// Create an instance of MathApplication with the mock Calculator
val mathApplication = MathApplication(calculatorMock)
// Perform the test using the MathApplication
val result = mathApplication.addNumbers(2, 3)
// Verify that the add method of the mock was called with the correct parameters
verify { calculatorMock.add(2, 3) }
// Verify the result of the test
assertEquals(5, result)
}
}

View File

@@ -0,0 +1,77 @@
package com.example.hpostesting
import android.content.Context
import android.net.ConnectivityManager
import androidx.arch.core.executor.testing.InstantTaskExecutorRule
import io.mockk.every
import io.mockk.mockk
import io.mockk.verify
import junit.framework.TestCase
import org.junit.Before
import org.junit.Rule
import org.junit.Test
import org.junit.runner.RunWith
import org.mockito.Mock
import org.mockito.junit.MockitoJUnitRunner
@RunWith(MockitoJUnitRunner::class)
class NetworkStatusLiveDataTest {
@get:Rule
val instantTaskExecutorRule = InstantTaskExecutorRule()
@Mock
private lateinit var mockContext: Context
@Mock
private lateinit var mockConnectivityManager: ConnectivityManager
@Before
fun setUp() {
// mockContext = ApplicationProvider.getApplicationContext<Context>()
// mockConnectivityManager = mockContext.getSystemService(Context.CONNECTIVITY_SERVICE) as ConnectivityManager
}
@Test
fun testAddNumbers() {
// Create a mock of the Calculator class using Mockito-Kotlin
val calculatorMock = mockk<Calculator>()
// Define the behavior of the add method on the mock
every { calculatorMock.add(2, 3) } returns 5
// Create an instance of MathApplication with the mock Calculator
val mathApplication = MathApplication(calculatorMock)
// Perform the test using the MathApplication
val result = mathApplication.addNumbers(2, 3)
// Verify that the add method of the mock was called with the correct parameters
verify { calculatorMock.add(2, 3) }
// Verify the result of the test
TestCase.assertEquals(5, result)
}
// @Test
// fun testNetworkStatusLiveData() {
// // Assuming mockConnectivityManager is a mocked ConnectivityManager instance
// val mockNetwork = mock(Network::class.java)
// val mockNetworkCapabilities = mock(NetworkCapabilities::class.java)
//
// // Define desired capabilities
// `when`(mockNetworkCapabilities.hasCapability(NetworkCapabilities.NET_CAPABILITY_INTERNET)).thenReturn(true)
// `when`(mockNetworkCapabilities.hasCapability(NetworkCapabilities.NET_CAPABILITY_VALIDATED)).thenReturn(true)
//
// // Set up network to return mocked capabilities
// `when`(mockConnectivityManager.activeNetwork).thenReturn(mockNetwork)
// `when`(mockConnectivityManager.getNetworkCapabilities(mockNetwork)).thenReturn(mockNetworkCapabilities)
//
// // Act
// val networkStatusLiveData = NetworkStatusLiveData(mockContext)
// val isConnected = networkStatusLiveData.value
//
// // Assert
// assertTrue("Network should be connected", isConnected!!)
// }
}