Compare commits

...

10 Commits

Author SHA1 Message Date
Mariya
1d34ce2a52 Added Offline Incubation feature
Added testStatus field
2023-12-07 16:42:32 +05:30
Mariya
ec3d0b8628 Added Offline Incubation feature 2023-12-07 16:31:33 +05:30
Mariya
7464bfef6d deleted unwanted code 2023-12-07 16:00:34 +05:30
Mariya
85986c87b1 offline incubation code is added 2023-12-07 15:36:28 +05:30
Mariya
dadddfd558 Issues fixed 2023-12-06 17:25:45 +05:30
Mariya
0903647500 Issues fixed 2023-12-06 16:08:52 +05:30
Mariya
326c66fea7 Issues fixed 2023-12-06 11:32:38 +05:30
Mariya
045eaee578 Issues fixed 2023-12-05 20:43:03 +05:30
Mariya
302960922e Issues fixed 2023-12-05 20:41:47 +05:30
Mariya
ea4fb6e4d2 Issues fixed 2023-12-05 20:16:20 +05:30
8 changed files with 401 additions and 499 deletions

View File

@@ -110,4 +110,13 @@ object Constants {
listOf(24500, 26250),
)
)
val COEFFICIENTS: Map<String, List<List<Double>>> = mapOf(
"HC-V1-005" to listOf(
listOf(1.5,0.0),
listOf(0.0,0.0)
)
)
}

View File

@@ -1,6 +1,8 @@
package com.example.hpostesting.presentation.adapter
import android.annotation.SuppressLint
import android.content.Context
import android.content.res.Resources
import android.view.LayoutInflater
import android.view.View
import android.view.ViewGroup
@@ -26,7 +28,9 @@ class OfflineUserListAdapter(private val view: View, private val batLevel: Int)
RecyclerView.Adapter<OfflineUserListAdapter.OfflineUserListViewHolder>() {
inner class OfflineUserListViewHolder(val binding: OfflineUserListViewBinding) :
RecyclerView.ViewHolder(binding.root)
RecyclerView.ViewHolder(binding.root) {
}
private val differCallback = object : DiffUtil.ItemCallback<HemoCubeTestData>() {
override fun areItemsTheSame(
@@ -54,61 +58,58 @@ class OfflineUserListAdapter(private val view: View, private val batLevel: Int)
return differ.currentList.size
}
@SuppressLint("SetTextI18n")
override fun onBindViewHolder(holder: OfflineUserListViewHolder, position: Int) {
val userList = differ.currentList[position]
holder.binding.apply {
userID.text = "User ID: ${userList._id}"
bloodGroup.text = "Blood group: ${userList.bloodGroup}"
time.text = "Time: ${userList.incubationTime}"
time.text = "Time: ${isBetween15And30Minutes(userList.incubationTime)} \n Started at: ${
SimpleDateFormat("HH:mm:ss").format(
SimpleDateFormat(
"yyyy-MM-dd HH:mm:ss", Locale.getDefault()
).parse(userList.incubationTime)!!
)
}"
if (userList.testStatus!!) {
teststatus.text = view.context.getString(R.string.test_concluded)
} else {
teststatus.text = view.context.getString(R.string.test_pending)
}
userCard.setOnClickListener {
if (batLevel < 40) {
Toast.makeText(
view.context,
context?.getString(R.string.low_battery_warning),
Toast.LENGTH_SHORT
).show()
return@setOnClickListener
}
if (userList.testStatus != null) {
if (userList.testStatus!!) {
Toast.makeText(
view.context,
context?.getString(R.string.test_already_conducted),
Toast.LENGTH_SHORT
).show()
} else {
if (userList.incubationTime != "") {
if (isBetween15And30Minutes(userList.incubationTime) < Constants.INCUBATION_TIME_MIN) {
Toast.makeText(
view.context,
context?.getString(R.string.incubation_not_completed),
Toast.LENGTH_SHORT
).show()
} else if (isBetween15And30Minutes(userList.incubationTime) > Constants.INCUBATION_TIME_MAX) {
Toast.makeText(
view.context,
context?.getString(R.string.incubation_crossed_30_minutes),
Toast.LENGTH_SHORT
).show()
} else {
DataHolder.selectedTest = UserData(
_id = userList._id,
bloodGroup = userList.bloodGroup,
incubationTime = userList.incubationTime
)
view.findNavController()
.navigate(R.id.action_nav_home_to_mainActivity)
}
showWarningToast(R.string.low_battery_warning)
} else {
if (userList.testStatus != null) {
if (userList.testStatus!!) {
showWarningToast(R.string.test_already_conducted)
} else {
Toast.makeText(
view.context,
context?.getString(R.string.incubation_not_started),
Toast.LENGTH_SHORT
).show()
if (userList.incubationTime != "") {
val incubationTimeDiff = isBetween15And30Minutes(userList.incubationTime)
if (incubationTimeDiff < 15) {
showWarningToast(R.string.incubation_not_completed)
} else if (incubationTimeDiff > 30) {
showWarningToast(R.string.incubation_crossed_30_minutes)
} else {
DataHolder.selectedTest = UserData(
_id = userList._id,
bloodGroup = userList.bloodGroup,
incubationTime = userList.incubationTime
)
view.findNavController()
.navigate(R.id.action_nav_home_to_mainActivity)
}
} else {
showWarningToast(R.string.incubation_not_started)
}
}
}
}
}
}
}
@@ -122,4 +123,25 @@ class OfflineUserListAdapter(private val view: View, private val batLevel: Int)
return diffMillis / (60 * 1000)
}
private fun showWarningToast(resId: Int) {
val contextToUse = view.context ?: return
val message = try {
contextToUse.getString(resId)
} catch (e: Resources.NotFoundException) {
"Resource not found for ID: $resId"
}
Toast.makeText(
contextToUse,
message,
Toast.LENGTH_SHORT
).show()
}
}

View File

@@ -138,6 +138,7 @@ class HomeFragment : Fragment() {
binding.btnSubmit.setOnClickListener {
val userId = binding.userId.text.toString()
val bloodGroup = binding.etBloodGroup.text
if (userId.length >= 18 && !bloodGroup.equals("Select Blood Group") || !bloodGroup.isNullOrBlank()) {
hemoCubeViewModel.addUser(
HemoCubeTestData(

View File

@@ -1,11 +1,11 @@
package com.example.hpostesting.presentation.hemocube
import com.example.hpostesting.presentation.dashboard.DashboardActivity
import android.content.Context
import android.content.Intent
import android.content.SharedPreferences
import android.graphics.Color
import android.os.Bundle
import android.util.Log
import android.view.LayoutInflater
import android.view.View
import android.view.ViewGroup
@@ -19,7 +19,7 @@ import com.example.hpostesting.data.constant.HemoCubeCommands
import com.example.hpostesting.data.model.patient.DeviceData
import com.example.hpostesting.data.model.patient.toHemoCubeTestData
import com.example.hpostesting.presentation.UsbServiceListener
import com.example.hpostesting.presentation.dashboard.DashboardActivity
import com.example.hpostesting.presentation.utils.MyDialogListener
import com.example.hpostesting.presentation.utils.UIUtils
import com.google.firebase.crashlytics.ktx.crashlytics
@@ -34,30 +34,16 @@ class HemoCubeFragment : Fragment() {
private lateinit var binding: FragmentHemoCubeReferenceBinding
private val hemoCubeViewModel: HemoCubeViewModel by activityViewModels()
private lateinit var sharedPreferences: SharedPreferences
private val testDetails = DataHolder.selectedTest?.toHemoCubeTestData()
val testDetails = DataHolder.selectedTest?.toHemoCubeTestData()
private var isOnline = false
private var currentDeviceData: DeviceData? = null
private var resultData: String = ""
private var deviceSerialNo: String = ""
private var coefficient: String? = ""
private var isUsingExistingBuffer = false
private var isTestOngoing = false
private var startListening = MutableLiveData<Boolean>(false)
private val testingTrace = Firebase.performance.newTrace("testing_trace")
private var led1BufferForDevice = 0.0
private var led2BufferForDevice = 0.0
private var led3BufferForDevice = 0.0
private var led4BufferForDevice = 0.0
private var led1SampleForDevice = 0.0
private var led2SampleForDevice = 0.0
private var led3SampleForDevice = 0.0
private var led4SampleForDevice = 0.0
private var fittedAbs1 = 0.0
private var fittedAbs2 = 0.0
private var fittedAbs3 = 0.0
private var fittedAbs4 = 0.0
private var _predictedDenovixRatio = 0.0
private var validationError = false
private var deviceHardwareId = ""
private var allErrorMessages = ""
val testingTrace = Firebase.performance.newTrace("testing_trace")
override fun onCreateView(
inflater: LayoutInflater, container: ViewGroup?, savedInstanceState: Bundle?,
@@ -71,9 +57,8 @@ class HemoCubeFragment : Fragment() {
override fun onViewCreated(view: View, savedInstanceState: Bundle?) {
super.onViewCreated(view, savedInstanceState)
initViews()
listenToHemoCube()
getDeviceInfo()
observeViewModel()
checkAndStartProcess()
}
private fun initViews() {
@@ -85,6 +70,11 @@ class HemoCubeFragment : Fragment() {
isOnline, true, sharedPreferences.getString(Constants.KIT_NUMBER, "")
)
}
if (isTestOngoing) {
// binding.btnKit.visibility = View.GONE
// binding.btnKit.isEnabled = false
// binding.btnKit.isClickable = false
}
binding.tvTitle2.visibility = View.GONE
binding.etAbhaId.visibility = View.GONE
@@ -93,59 +83,27 @@ class HemoCubeFragment : Fragment() {
binding.btnGo.visibility = View.GONE
// binding.btnSubmit.isEnabled = false
// binding.btnSubmit.isClickable = false
binding.btnPlacebuffer.visibility = View.GONE
binding.tvName.text = "Name: ${testDetails?.name}\n ID: ${testDetails?._id}"
binding.tvSubtitle4.text = "Config"
binding.btnSamplestart.setOnClickListener {
activity?.runOnUiThread {
binding.tvSubtitle4.visibility = View.VISIBLE
// binding.tvSubtitle4.text = "Sample Started"
}
startSampleProcess()
it.visibility = View.GONE
}
binding.btnPlacebuffer.setOnClickListener {
if (isBufferValueAvailable()) {
showBufferAlertDialog()
} else {
activity?.runOnUiThread {
binding.tvSubtitle4.visibility = View.VISIBLE
// binding.tvSubtitle4.text = "Buffer Started"
}
checkAndStartProcess()
it.visibility = View.GONE
}
}
Log.e("nametext", binding.tvName.text.toString())
}
private fun observeViewModel() {
hemoCubeViewModel.fireBaseUpload.observe(viewLifecycleOwner) { result ->
if (result == "Success") {
showToast(R.string.test_upload)
activity?.runOnUiThread {
binding.btnSubmit.visibility = View.GONE
binding.btnDigitalCard.visibility = View.VISIBLE
binding.btnDigitalCard.setOnClickListener {
val i = Intent(
requireContext().applicationContext, DigitalCardActivity::class.java
)
startActivity(i)
}
}
showToast("Test Results Uploaded Successfully")
val i = Intent(
requireContext().applicationContext, DashboardActivity::class.java
)
startActivity(i)
(activity as HemocubeActivity).finish()
}
if (result == "Local") {
showToast(R.string.internt_not_local)
showToast("Internet not available, test details stored locally")
startActivity(Intent(requireActivity(), DashboardActivity::class.java))
}
if (result == "Error") {
showToast(R.string.error_local)
showToast("Error uploading data, test details stored locally")
startActivity(Intent(requireActivity(), DashboardActivity::class.java))
}
@@ -160,13 +118,25 @@ class HemoCubeFragment : Fragment() {
hemoCubeViewModel.networkStatusLiveData.observe(viewLifecycleOwner) { isNetworkAvailable ->
apply {
DataHolder.hemoCubeTestData?.let {
currentDeviceData?.coefficients?.let { coefficients ->
val coefficient1 = coefficients[0]
val coefficient2 = coefficients[1]
val result = coefficient1 * coefficient2
// if (isNetworkAvailable) {
// Online mode
DataHolder.hemoCubeTestData?.let {
currentDeviceData?.coefficients?.let { coefficients ->
val coefficient1 = coefficients[0]
val coefficient2 = coefficients[1]
val result = coefficient1 * coefficient2
// Process result in online mode
}
}
}
// } else {
// // Offline mode
// val coefficient1 = Constants.COEFFICIENTS[deviceSerialNo]?.get(0)?.get(0).toString().toDoubleOrNull() ?: 0.0
// val coefficient2 = Constants.COEFFICIENTS[deviceSerialNo]?.get(1)?.get(0).toString().toDoubleOrNull() ?: 0.0
// val result = coefficient1 * coefficient2
//
// // Process result in offline mode
// }
isOnline = isNetworkAvailable
}
}
@@ -174,48 +144,51 @@ class HemoCubeFragment : Fragment() {
hemoCubeViewModel.messages.observe(viewLifecycleOwner) {
binding.tvSubtitle4.text = it
}
// startListening.observe(viewLifecycleOwner) {
// if (it) {
// lifecycleScope.launch {
// delay(1000)
// if (binding.tvSubtitle4.text.toString().isEmpty()) {
// (activity as HemocubeActivity).reconnectDevice()
// if (isBufferValueAvailable()) {
// showBufferAlertDialog()
// } else {
// listenToHemoCube()
// startBufferProcess()
// }
// }
// }
// }
// }
}
private fun checkAndStartProcess() {
startBufferProcess()
if (isBufferValueAvailable()) {
showBufferAlertDialog()
} else {
listenToHemoCube()
startBufferProcess()
}
}
private fun isBufferValueAvailable(): Boolean {
return try {
if (sharedPreferences.getString(
Constants.BUFFER_VALUE_1, ""
) != "" && sharedPreferences.getString(Constants.BUFFER_VALUE_2, "") != ""
&& sharedPreferences.getString(Constants.BUFFER_VALUE_3, "") != ""
&& sharedPreferences.getString(Constants.BUFFER_VALUE_4, "") != ""
) {
sharedPreferences.getString(Constants.BUFFER_VALUE_1, "")
?.toDouble()!! > 0.0 && sharedPreferences.getString(
Constants.BUFFER_VALUE_2,
""
)
?.toDouble()!! > 0.0 && sharedPreferences.getString(
Constants.BUFFER_VALUE_3,
""
)
?.toDouble()!! > 0.0 && sharedPreferences.getString(
Constants.BUFFER_VALUE_4,
""
)
?.toDouble()!! > 0.0
} else {
false
}
} catch (e: Exception) {
showToast(R.string.error_exist)
return if (sharedPreferences.getString(
Constants.BUFFER_VALUE_1, ""
) != "" && sharedPreferences.getString(Constants.BUFFER_VALUE_2, "") != ""
) {
sharedPreferences.getString(Constants.BUFFER_VALUE_1, "")
?.toDouble()!! > 0.0 && sharedPreferences.getString(Constants.BUFFER_VALUE_2, "")
?.toDouble()!! > 0.0
} else {
false
}
}
private fun showBufferAlertDialog() {
val title = "WARNING"
val message = getString(R.string.do_exist)
val message = "Do you want to continue with existing buffer?"
val negativeText = getString(R.string.no)
val positiveText = getString(R.string.yes)
val positiveText = "Yes"
UIUtils.createAlertDialog(requireContext(),
title,
@@ -224,15 +197,13 @@ class HemoCubeFragment : Fragment() {
positiveText,
object : MyDialogListener {
override fun onClickNegativeButton() {
listenToHemoCube()
startBufferProcess()
}
override fun onClickPositiveButton() {
activity?.runOnUiThread {
binding.btnPlacebuffer.visibility = View.GONE
binding.btnSamplestart.visibility = View.VISIBLE
binding.tvSubtitle4.text = getString(R.string.place_sample)
}
listenToHemoCube()
startSampleProcess()
isUsingExistingBuffer = true
}
})
@@ -263,123 +234,47 @@ class HemoCubeFragment : Fragment() {
}
})
} catch (e: Exception) {
showToast(R.string.test_ongoing)
showToast("test is going on")
Firebase.crashlytics.recordException(e)
}
}
private fun getDeviceInfo() {
hemoCubeViewModel.progressBar.postValue(true)
(activity as HemocubeActivity).mService.sendAndListenToHemoCube(
HemoCubeCommands.getDeviceId,
object : UsbServiceListener {
override fun onUsbRead(data: ByteArray?) {
data?.let {
val stringData = String(it)
hemoCubeViewModel.messages.postValue(stringData)
binding.tvSubtitle4.text = stringData
}
}
override fun onUsbError(e: Exception?) {
hemoCubeViewModel.progressBar.postValue(false)
}
})
}
private fun handleUsbData(stringData: String, fullReadOutput: StringBuilder) {
if (stringData.contains("#")) {
hemoCubeViewModel.messages.postValue(stringData)
isTestOngoing = true
}
resultData += stringData
when {
stringData.contains("SN") -> {
val slData = stringData.split(" ")
if (slData.size > 1) {
val hardwareId = slData[1].trim()
deviceHardwareId = hardwareId
with(sharedPreferences.edit()) {
putString(Constants.DEVICE_ID, hardwareId)
apply()
}
}
activity?.runOnUiThread {
binding.btnPlacebuffer.visibility = View.VISIBLE
}
hemoCubeViewModel.messages.postValue(getString(R.string.start))
}
stringData.contains("#BS") -> {
hemoCubeViewModel.messages.postValue(getString(R.string.buffer_started))
}
stringData.contains("#BC") -> {
activity?.runOnUiThread {
binding.tvSubtitle4.text = getString(R.string.buffer_completed)
binding.btnSamplestart.visibility = View.VISIBLE
}
}
stringData.contains("#SS") -> {
activity?.runOnUiThread {
binding.tvSubtitle4.text = getString(R.string.sample_started)
binding.btnSamplestart.visibility = View.GONE
}
}
stringData.contains("#SC") -> {
hemoCubeViewModel.messages.postValue(
getString(R.string.sample_completed) + "\n" + getString(R.string.gathering_data))
stringData.contains("#Buffer Completed") -> showStartSampleDialog()
stringData.contains("#Sample Completed") -> {
fetchResult()
testingTrace.stop()
}
resultData.contains("REND") -> {
hemoCubeViewModel.messages.postValue(
getString(R.string.data_collected_processing_data)
)
val resultLines = resultData.split("\\s+(?=LB|LS)".toRegex())
var bufferIntensity = resultLines[1].split(' ')[1].trim()
led1BufferForDevice = if (isUsingExistingBuffer) {
sharedPreferences.getString(Constants.BUFFER_VALUE_1, "")?.toDoubleOrNull()!!
stringData.contains("RESULT") || resultData.contains("REND") -> {
var validString: String
val results: List<String>
if (stringData.contains("RESULT")) {
validString = isValidResult(stringData)
if (validString.isEmpty()) {
results = resultData.split("\n")
validString = parseResult(results)
}
} else {
bufferIntensity.toDoubleOrNull()!!
results = resultData.split("\n")
validString = parseResult(results)
}
bufferIntensity = resultLines[2].split(' ')[1].trim()
led2BufferForDevice = if (isUsingExistingBuffer) {
sharedPreferences.getString(Constants.BUFFER_VALUE_2, "")?.toDoubleOrNull()!!
} else {
bufferIntensity.toDoubleOrNull()!!
if (validString.isNotEmpty()) {
handleValidResult(validString, resultData)
}
bufferIntensity = resultLines[3].split(' ')[1].trim()
led3BufferForDevice = if (isUsingExistingBuffer) {
sharedPreferences.getString(Constants.BUFFER_VALUE_3, "")?.toDoubleOrNull()!!
} else {
bufferIntensity.toDoubleOrNull()!!
}
bufferIntensity = resultLines[4].split(' ')[1].trim()
led4BufferForDevice = if (isUsingExistingBuffer) {
sharedPreferences.getString(Constants.BUFFER_VALUE_4, "")?.toDoubleOrNull()!!
} else {
bufferIntensity.toDoubleOrNull()!!
}
var sampleIntensity = resultLines[5].split(' ')[1].trim()
led1SampleForDevice = resultLines[5].split(' ')[1].trim().toDoubleOrNull()!!
sampleIntensity = resultLines[6].split(' ')[1].trim()
led2SampleForDevice = resultLines[6].split(' ')[1].trim().toDoubleOrNull()!!
sampleIntensity = resultLines[7].split(' ')[1].trim()
led3SampleForDevice = resultLines[7].split(' ')[1].trim().toDoubleOrNull()!!
sampleIntensity = resultLines[8].split(' ')[1].split('\r')[0].trim()
led4SampleForDevice =
resultLines[8].split(' ')[1].split('\r')[0].trim().toDoubleOrNull()!!
processResult()
}
}
}
private fun showError() {
activity?.runOnUiThread {
UIUtils.createAlertDialog(requireContext(),
@@ -402,248 +297,166 @@ class HemoCubeFragment : Fragment() {
// If the test is ongoing, don't allow the back button action
// You can optionally show a message to the user indicating why the back button is disabled
// For example, show a Toast or Snackbar.
showToast(R.string.test_go_noback)
showToast("Test is ongoing. Cannot go back.")
} else {
// If the test is not ongoing, you can trigger the back action of the hosting activity
activity?.onBackPressed()
}
}
private fun processResult() {
private fun showStartSampleDialog() {
activity?.runOnUiThread {
UIUtils.createAlertDialog(requireContext(),
"Start Sample",
"Do you want to start sample reading?",
getString(R.string.no),
"Yes",
object : MyDialogListener {
override fun onClickNegativeButton() {}
override fun onClickPositiveButton() {
listenToHemoCube()
startSampleProcess()
}
})
}
}
fun handleValidResult(validString: String, fullReadOutput: String) {
try {
hemoCubeViewModel.messages.postValue(getString(R.string.processing_result))
val result = validString.split(" ")
val deviceLog = resultData
val pInfo = requireActivity().packageManager.getPackageInfo(
requireActivity().packageName, 0
)
val version = pInfo.versionName
val led1Average = log10(led1BufferForDevice.div(led1SampleForDevice))
val led2Average = log10(led2BufferForDevice.div(led2SampleForDevice))
val led3Average = log10(led3BufferForDevice.div(led3SampleForDevice))
val led4Average = log10(led4BufferForDevice.div(led4SampleForDevice))
val deviceRatio = led3Average / led1Average
if (led1BufferForDevice < Constants.BUFFER_INTENSITY_THRESHOLDS[deviceHardwareId]?.get(0)
?.get(0)!!
|| led2BufferForDevice < Constants.BUFFER_INTENSITY_THRESHOLDS[deviceHardwareId]?.get(
1
)?.get(0)!!
|| led3BufferForDevice < Constants.BUFFER_INTENSITY_THRESHOLDS[deviceHardwareId]?.get(
2
)?.get(0)!!
|| led4BufferForDevice < Constants.BUFFER_INTENSITY_THRESHOLDS[deviceHardwareId]?.get(
3
)?.get(0)!!
) {
validationError = true
allErrorMessages += "Error: Invalid Test. Improper buffer reading (low)"
activity?.runOnUiThread {
binding.errorMessage.text = getString(R.string.error_improper_buffer_low)
binding.errorMessage.visibility = View.VISIBLE
}
}
if (led1BufferForDevice > Constants.BUFFER_INTENSITY_THRESHOLDS[deviceHardwareId]?.get(0)
?.get(1)!!
|| led2BufferForDevice > Constants.BUFFER_INTENSITY_THRESHOLDS[deviceHardwareId]?.get(
1
)?.get(1)!!
|| led3BufferForDevice > Constants.BUFFER_INTENSITY_THRESHOLDS[deviceHardwareId]?.get(
2
)?.get(1)!!
|| led4BufferForDevice > Constants.BUFFER_INTENSITY_THRESHOLDS[deviceHardwareId]?.get(
3
)?.get(1)!!
) {
validationError = true
allErrorMessages += "Error: Invalid Test. Improper buffer reading (high)" + "\n"
activity?.runOnUiThread {
binding.errorMessage.text =
getString(R.string.error_improper_buffer_high)
binding.errorMessage.visibility = View.VISIBLE
binding.btnSubmit.isEnabled = true
binding.btnSubmit.isClickable = true
}
}
var gradient = Constants.DEVICE_CONFIGURATION[deviceHardwareId]?.get(0)?.get(0)
var constant = Constants.DEVICE_CONFIGURATION[deviceHardwareId]?.get(0)?.get(1)
fittedAbs1 = gradient?.times(led1Average)?.plus(constant!!)!!
gradient = Constants.DEVICE_CONFIGURATION[deviceHardwareId]?.get(1)?.get(0)
constant = Constants.DEVICE_CONFIGURATION[deviceHardwareId]?.get(1)?.get(1)
fittedAbs2 = gradient?.times(led2Average)?.plus(constant!!)!!
gradient = Constants.DEVICE_CONFIGURATION[deviceHardwareId]?.get(2)?.get(0)
constant = Constants.DEVICE_CONFIGURATION[deviceHardwareId]?.get(2)?.get(1)
fittedAbs3 = gradient?.times(led3Average)?.plus(constant!!)!!
gradient = Constants.DEVICE_CONFIGURATION[deviceHardwareId]?.get(3)?.get(0)
constant = Constants.DEVICE_CONFIGURATION[deviceHardwareId]?.get(3)?.get(1)
fittedAbs4 = gradient?.times(led4Average)?.plus(constant!!)!!
_predictedDenovixRatio = fittedAbs3.div(fittedAbs1)
if (fittedAbs1 <= fittedAbs2) {
validationError = true
allErrorMessages += "Error: Invalid Test. Problem with de-oxygenation" + "\n"
activity?.runOnUiThread {
binding.errorMessage.text = getString(R.string.error_invalid_test)
binding.errorMessage.visibility = View.VISIBLE
}
}
if (fittedAbs1 < 0 || fittedAbs2 < 0 || fittedAbs3 < 0 || fittedAbs4 < 0) {
validationError = true
activity?.runOnUiThread {
binding.errorMessage.text = getString(R.string.error_negative_abs)
binding.errorMessage.visibility = View.VISIBLE
}
}
if (fittedAbs3 < 0.1) {
validationError = true
allErrorMessages += "Error: Low Hb. Repeat test" + "\n"
activity?.runOnUiThread {
binding.errorMessage.text = "Error: Low Hb. Repeat test"
binding.errorMessage.visibility = View.VISIBLE
}
}
DataHolder.hemoCubeTestData?.apply {
deviceId = sharedPreferences.getString(Constants.DEVICE_ID, "").toString()
led1Buffer = led1BufferForDevice
led2Buffer = led2BufferForDevice
led3Buffer = led3BufferForDevice
led4Buffer = led4BufferForDevice
appVersion = version
this.led1Sample = led1SampleForDevice
this.led2Sample = led2SampleForDevice
this.led3Sample = led3SampleForDevice
this.led4Sample = led4SampleForDevice
this.led1Average = led1Average
this.led2Average = led2Average
this.led3Average = led3Average
this.led4Average = led4Average
this.abs1 = fittedAbs1
this.abs2 = fittedAbs2
this.abs3 = fittedAbs3
this.abs4 = fittedAbs4
this.deviceRatio = deviceRatio
this.calculatedRatio = calculateRatio(deviceRatio)
this.predictedDenovixRatio = _predictedDenovixRatio
this.coefficients = currentDeviceData?.coefficients?.get(0)
.toString() + ", " + currentDeviceData?.coefficients?.get(1).toString()
this.classificationResult = findResult(calculatedRatio)
this.prdClassification = absorbanceBasedClassification(predictedDenovixRatio)
hemoCubeViewModel.messages.postValue(this.prdClassification)
this.errorMessages = allErrorMessages
this.resultData = deviceLog
this.batteryLevel = hemoCubeViewModel.getBatteryLevel().toString()
this.batteryCapacity =
hemoCubeViewModel.getBatteryCapacity(requireContext()).toString()
this.batteryMaxCapacity =
hemoCubeViewModel.getBatteryMaxCapacity(requireContext()).toString()
this.batteryTemperature = hemoCubeViewModel.getBatteryTemperature().toString()
this.batteryVoltage =
hemoCubeViewModel.getBatteryVoltage(requireContext()).toString()
}
if (!isUsingExistingBuffer) {
if (result.size == 8) {
val deviceSerialNo = result[2]
with(sharedPreferences.edit()) {
putString(Constants.BUFFER_VALUE_1, led1BufferForDevice.toString())
putString(Constants.BUFFER_VALUE_2, led2BufferForDevice.toString())
putString(Constants.BUFFER_VALUE_3, led3BufferForDevice.toString())
putString(Constants.BUFFER_VALUE_4, led4BufferForDevice.toString())
putString(Constants.DEVICE_ID, deviceSerialNo)
apply()
}
}
val loginId = sharedPreferences.getString(Constants.USER_ID, "").toString()
if (checkDeviceIdMismatch(deviceSerialNo, loginId)) {
activity?.runOnUiThread {
binding.errorMessage.text = "Warning: Login Id is different"
binding.errorMessage.visibility = View.VISIBLE
}
}
val led1BufferForDevice = if (isUsingExistingBuffer) {
sharedPreferences.getString(Constants.BUFFER_VALUE_1, "")?.toDoubleOrNull()
} else {
result[3].toDoubleOrNull()
}
val led2BufferForDevice = if (isUsingExistingBuffer) {
sharedPreferences.getString(Constants.BUFFER_VALUE_2, "")?.toDoubleOrNull()
} else {
result[4].toDoubleOrNull()
}
val pInfo = requireActivity().packageManager.getPackageInfo(
requireActivity().packageName, 0
)
val version = pInfo.versionName
val led1Sample = result[5].toDoubleOrNull()
val led2Sample = result[6].toDoubleOrNull()
val led1Average = log10(led1BufferForDevice?.div(led1Sample!!) ?: 0.0)
val led2Average = log10(led2BufferForDevice?.div(led2Sample!!) ?: 0.0)
val deviceRatio = led1Average / led2Average
val coefficientsList = Constants.COEFFICIENTS[deviceSerialNo]
// if (coefficientsList != null) {
val coefficient1 = coefficientsList?.get(0)?.get(0).toString()
val coefficient2 = coefficientsList?.get(1)?.get(0).toString()
val coefficientsString = "$coefficient1,$coefficient2"
// if (!validationError) {
activity?.runOnUiThread {
binding.btnSubmit.visibility = View.VISIBLE
binding.btnSubmit.isEnabled = true
binding.btnSubmit.isClickable = true
binding.clParent.setBackgroundColor(Color.parseColor("#edfffd"))
// if (led1BufferForDevice!! > 20000 && led1BufferForDevice < 24000 && led2BufferForDevice!! > 20000 && led2BufferForDevice < 24000) {
// if (led1Sample!! < led1BufferForDevice && led1Sample < 24000 && led2Sample!! < led2BufferForDevice && led2Sample < 24000) {
// if (deviceRatio < 0.08) {
// if (deviceRatio > 1.07) {
//
// }
// }
// }
// }
if (led1Average < 0 || led2Average < 0) {
activity?.runOnUiThread{
binding.errorMessage.text = "Warning: Negative Abs. Retake Blank Reading"
binding.errorMessage.visibility = View.VISIBLE
}
}
DataHolder.hemoCubeTestData?.apply {
deviceId = deviceSerialNo
led1Buffer = led1BufferForDevice
led2Buffer = led2BufferForDevice
appVersion = version
this.led1Sample = led1Sample
this.led2Sample = led2Sample
this.led1Average = led1Average
this.led2Average = led2Average
this.deviceRatio = deviceRatio
this.calculatedRatio = calculateRatio(deviceRatio)
// this.coefficients = currentDeviceData?.coefficients?.get(0).toString() + ", " + currentDeviceData?.coefficients?.get(1).toString()
this.coefficients = coefficientsString
this.classificationResult = findResult(calculatedRatio)
hemoCubeViewModel.messages.postValue(this.classificationResult)
this.resultData = deviceLog
if (!isUsingExistingBuffer) {
with(sharedPreferences.edit()) {
putString(Constants.BUFFER_VALUE_1, led1Buffer.toString())
putString(Constants.BUFFER_VALUE_2, led2Buffer.toString())
apply()
}
}
activity?.runOnUiThread {
binding.btnSubmit.visibility = View.VISIBLE
binding.btnSubmit.isEnabled = true
binding.btnSubmit.isClickable = true
binding.clParent.setBackgroundColor(Color.parseColor("#edfffd"))
}
}
}
// }
} catch (e: Exception) {
Toast.makeText(
requireContext(),
R.string.error_processing_device_data,
"Error while processing device data",
Toast.LENGTH_SHORT
).show()
Firebase.crashlytics.recordException(e)
}
}
fun findResult(calculatedRatio: Double?): String {
private fun findResult(calculatedRatio: Double?): String {
try {
hemoCubeViewModel.messages.postValue("result classification")
if (calculatedRatio != null) {
if (calculatedRatio < 0.05)
return getString(R.string.error_repeat_test_higher_volume)
return "Inconclusive. Very low Absorbance - Repeat test with Higher Blood Volume"
if (calculatedRatio in 0.05..0.155)
return getString(R.string.normal)
return "Normal"
if (calculatedRatio in 0.155..0.175)
return getString(R.string.negative_borderline)
return "Negative Borderline. Repeat Test"
if (calculatedRatio in 0.175..0.22)
return getString(R.string.sickle_cell_trait)
return "Sickle Cell Trait"
if (calculatedRatio in 0.22..0.25)
return getString(R.string.positive_for_sickle_cell)
return "Positive for Sickle Cell. HPLC for Confirmation"
if (calculatedRatio in 0.25..0.35)
return getString(R.string.sickle_cell_disease)
return "Sickle Cell Disease"
if (calculatedRatio > 0.35)
return getString(R.string.error_repeat_test_lower_volume)
return "Inconclusive. Repeat with test with lower volume of blood"
} else {
return getString(R.string.invalid)
return "NULL"
}
} catch (e: Exception) {
showToast(R.string.error_classification)
showToast("error while performing classification")
Firebase.crashlytics.recordException(e)
return getString(R.string.error)
return "ERROR"
}
return getString(R.string.invalid)
return "NULL"
}
private fun absorbanceBasedClassification(predictedDenovixRatio: Double?): String {
try {
hemoCubeViewModel.messages.postValue("result classification")
if (predictedDenovixRatio != null) {
if (predictedDenovixRatio in 0.0..0.16)
return getString(R.string.normal)
if (predictedDenovixRatio in 0.16..0.165)
return getString(R.string.negative_borderline)
if (predictedDenovixRatio in 0.165..0.235)
return getString(R.string.sickle_cell_trait)
if (predictedDenovixRatio in 0.235..0.24)
return getString(R.string.positive_borderline)
if (predictedDenovixRatio in 0.24..1.0)
return getString(R.string.sickle_cell_disease)
} else {
return getString(R.string.invalid)
}
} catch (e: Exception) {
showToast(R.string.error_classification)
Firebase.crashlytics.recordException(e)
return getString(R.string.error)
}
return getString(R.string.invalid)
}
private fun showToast(messageResId: Int) {
Toast.makeText(requireContext(), getString(messageResId), Toast.LENGTH_SHORT).show()
private fun showToast(message: String) {
Toast.makeText(requireContext(), message, Toast.LENGTH_SHORT).show()
}
private fun startBufferProcess() {
hemoCubeViewModel.progressBar.postValue(true)
activity?.runOnUiThread {
binding.btnPlacebuffer.visibility = View.GONE
}
(activity as HemocubeActivity).mService.sendAndListenToHemoCube(HemoCubeCommands.startBuffer,
object : UsbServiceListener {
override fun onUsbRead(data: ByteArray?) {}
@@ -682,14 +495,38 @@ class HemoCubeFragment : Fragment() {
}
private fun calculateRatio(ratio: Double): Double {
val coefficient1 = currentDeviceData?.coefficients?.get(0) ?: 0.0
val coefficient2 = currentDeviceData?.coefficients?.get(1) ?: 0.0
val coefficient1: Double = (Constants.COEFFICIENTS[deviceSerialNo]?.get(0) ?: 0.0) as Double
val coefficient2: Double = (Constants.COEFFICIENTS[deviceSerialNo]?.get(1) ?: 0.0) as Double
return coefficient1 * ratio + coefficient2
}
private fun parseResult(frames: List<String>): String {
val lines = mutableListOf<String>()
for (frame in frames.reversed()) {
if (frame.contains("REND") || frame.contains("RESULT")) lines += frame
if (frame.contains("RESULT")) {
break
}
}
val line = lines.reversed().joinToString("").trim()
if (line.contains("RESULT") && line.split(" ").size == 8) {
return line
}
return ""
}
private fun isValidResult(line: String): String {
return if (line.contains("RESULT") && line.split(" ").size == 8) {
line
} else {
""
}
}
private fun checkDeviceIdMismatch(deviceId: String, loginId: String): Boolean {
if (!deviceId.isNullOrEmpty() && !loginId.isNullOrEmpty() && deviceId.last() != loginId.last())
return true
return false
}
}
}

View File

@@ -166,6 +166,8 @@ class HemoCubeViewModel @Inject constructor(
fireBaseUpload.postValue("Error")
hemoCubeDao.insertAll(testDetails)
}
else -> {}
}
} catch (e: Exception) {
Log.e("Testdb", "Exception during data upload: ${e.message}")
@@ -190,6 +192,8 @@ class HemoCubeViewModel @Inject constructor(
Log.e("Testdb", "Error uploading data to Firestore: $response")
fireBaseUpload.postValue("Error")
}
else -> {}
}
} catch (e: Exception) {
Log.e("Testdb", "Exception during data upload: ${e.message}")

View File

@@ -34,7 +34,7 @@ class UsbService : Service() {
fun connect(driver: UsbSerialDriver, connection: UsbDeviceConnection) {
mPort = driver.ports[0] // Most devices have just one port (port 0)
mPort.open(connection)
mPort.setParameters(9600, 8, UsbSerialPort.STOPBITS_1, UsbSerialPort.PARITY_NONE)
mPort.setParameters(115200, 8, UsbSerialPort.STOPBITS_1, UsbSerialPort.PARITY_NONE)
isUsbConnected = true
Log.d(TAG, "My Usb Connected ${mPort.driver}")

View File

@@ -31,17 +31,17 @@
app:layout_constraintStart_toStartOf="parent"
app:layout_constraintTop_toBottomOf="@id/tv_title" />
<!-- <TextView-->
<!-- android:id="@+id/tv_subtitle3"-->
<!-- style="@style/title2"-->
<!-- android:layout_width="0dp"-->
<!-- android:layout_height="wrap_content"-->
<!-- android:layout_marginHorizontal="24dp"-->
<!-- android:layout_marginTop="16dp"-->
<!-- android:text="@string/step5"-->
<!-- app:layout_constraintEnd_toEndOf="parent"-->
<!-- app:layout_constraintStart_toStartOf="parent"-->
<!-- app:layout_constraintTop_toBottomOf="@id/tv_subtitle2" />-->
<!-- <TextView-->
<!-- android:id="@+id/tv_subtitle3"-->
<!-- style="@style/title2"-->
<!-- android:layout_width="0dp"-->
<!-- android:layout_height="wrap_content"-->
<!-- android:layout_marginHorizontal="24dp"-->
<!-- android:layout_marginTop="16dp"-->
<!-- android:text="@string/step5"-->
<!-- app:layout_constraintEnd_toEndOf="parent"-->
<!-- app:layout_constraintStart_toStartOf="parent"-->
<!-- app:layout_constraintTop_toBottomOf="@id/tv_subtitle2" />-->
<TextView
android:id="@+id/tv_name"
@@ -147,35 +147,8 @@
app:layout_constraintHorizontal_bias="1.0"
app:layout_constraintStart_toEndOf="@id/et_abha_id"
app:layout_constraintTop_toTopOf="@id/et_abha_id" />
<Button
android:visibility="gone"
android:id="@+id/btn_samplestart"
android:layout_width="wrap_content"
android:layout_height="wrap_content"
android:layout_marginHorizontal="16dp"
android:layout_marginTop="24dp"
android:clickable="false"
android:text="@string/Start_Sample"
android:textColor="@color/white"
app:layout_constraintEnd_toEndOf="parent"
app:layout_constraintStart_toStartOf="parent"
app:layout_constraintTop_toBottomOf="@id/btn_placebuffer" />
<Button
android:id="@+id/btn_placebuffer"
android:layout_width="wrap_content"
android:layout_height="wrap_content"
android:layout_marginHorizontal="16dp"
android:layout_marginTop="24dp"
android:clickable="false"
android:text="@string/place_buffer"
android:textColor="@color/white"
app:layout_constraintEnd_toEndOf="parent"
app:layout_constraintStart_toStartOf="parent"
app:layout_constraintTop_toBottomOf="@id/btn_submit" />
<Button
android:visibility="gone"
android:id="@+id/btn_submit"
@@ -205,19 +178,62 @@
app:layout_constraintStart_toStartOf="parent"
app:layout_constraintTop_toBottomOf="@id/btn_submit" />
<Button
android:visibility="gone"
android:id="@+id/btn_digitalCard"
android:layout_width="wrap_content"
android:layout_height="wrap_content"
android:layout_marginHorizontal="16dp"
android:layout_marginTop="24dp"
android:clickable="false"
android:text="DigitalCard View"
android:textColor="@color/white"
app:layout_constraintEnd_toEndOf="parent"
app:layout_constraintStart_toStartOf="parent"
app:layout_constraintTop_toBottomOf="@id/error_message" />
<!-- <com.google.android.material.textfield.TextInputLayout-->
<!-- android:id="@+id/til_blood_group"-->
<!-- style="@style/Widget.MaterialComponents.TextInputLayout.OutlinedBox.ExposedDropdownMenu"-->
<!-- android:layout_width="match_parent"-->
<!-- android:layout_height="wrap_content"-->
<!-- android:layout_marginHorizontal="24dp"-->
<!-- android:layout_marginTop="16dp"-->
<!-- app:layout_constraintEnd_toEndOf="parent"-->
<!-- app:layout_constraintStart_toStartOf="parent"-->
<!-- app:layout_constraintTop_toBottomOf="@id/tv_subtitle4">-->
<!-- <AutoCompleteTextView-->
<!-- android:id="@+id/et_blood_group"-->
<!-- android:layout_width="match_parent"-->
<!-- android:layout_height="wrap_content"-->
<!-- android:hint="@string/select_blood_group"-->
<!-- android:inputType="none"-->
<!-- android:labelFor="@id/til_blood_group"-->
<!-- app:simpleItems="@array/blood_group" />-->
<!-- </com.google.android.material.textfield.TextInputLayout>-->
<!-- <Button-->
<!-- android:id="@+id/btn_kit"-->
<!-- android:layout_width="wrap_content"-->
<!-- android:layout_height="wrap_content"-->
<!-- android:layout_margin="10dp"-->
<!-- android:text="@string/new_kit"-->
<!-- android:textColor="@color/white"-->
<!-- app:layout_constraintBottom_toBottomOf="parent"-->
<!-- app:layout_constraintEnd_toEndOf="parent"-->
<!-- app:layout_constraintStart_toStartOf="parent" />-->
<!-- <Button-->
<!-- android:id="@+id/btn_buffer"-->
<!-- android:layout_width="wrap_content"-->
<!-- android:layout_height="wrap_content"-->
<!-- android:text="@string/new_buffer"-->
<!-- android:textColor="@color/white"-->
<!-- android:layout_margin="10dp"-->
<!-- app:layout_constraintBottom_toBottomOf="parent"-->
<!-- app:layout_constraintStart_toStartOf="parent"-->
<!-- app:layout_constraintEnd_toStartOf="@id/btn_kit"/>-->
<!-- <Button-->
<!-- android:id="@+id/btn_read"-->
<!-- android:layout_width="wrap_content"-->
<!-- android:layout_height="wrap_content"-->
<!-- android:text="@string/read"-->
<!-- android:layout_margin="16dp"-->
<!-- android:clickable="false"-->
<!-- app:layout_constraintTop_toBottomOf="@id/btn_set_reference"-->
<!-- app:layout_constraintStart_toStartOf="parent" />-->
<!-- </androidx.constraintlayout.widget.ConstraintLayout>-->
<ProgressBar
android:id="@+id/progressBar"
android:layout_width="wrap_content"
@@ -233,5 +249,5 @@
app:layout_constraintTop_toTopOf="parent" />
</androidx.constraintlayout.widget.ConstraintLayout>
</layout>
</layout>

View File

@@ -48,6 +48,20 @@
app:layout_constraintStart_toStartOf="parent"
app:layout_constraintTop_toBottomOf="@id/userID"
tools:text="UserID: MohamedKaif" />
<TextView
android:id="@+id/teststatus"
android:layout_width="0dp"
android:layout_height="wrap_content"
style="@style/title1_1"
android:layout_marginTop="4dp"
android:layout_marginStart="16dp"
android:gravity="start"
android:textColor="@color/black"
android:textSize="14sp"
app:layout_constraintEnd_toEndOf="parent"
app:layout_constraintStart_toStartOf="parent"
app:layout_constraintTop_toBottomOf="@id/bloodGroup"
tools:text="Test Status: Completed"/>
<TextView
android:id="@+id/time"
@@ -61,9 +75,8 @@
android:textSize="14sp"
app:layout_constraintEnd_toEndOf="parent"
app:layout_constraintStart_toStartOf="parent"
app:layout_constraintTop_toBottomOf="@id/bloodGroup"
tools:text="Test Status: Completed" />
app:layout_constraintTop_toBottomOf="@id/teststatus"
tools:text="startedAt: yyyy-MM-dd HH:mm:ss" />
</androidx.constraintlayout.widget.ConstraintLayout>
</androidx.cardview.widget.CardView>